3opt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:18, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3opt| PDB=3opt | SCENE= }}
 
-
===Crystal structure of the Rph1 catalytic core with a-ketoglutarate===
 
-
{{ABSTRACT_PUBMED_21067515}}
 
-
==Function==
+
==Crystal structure of the Rph1 catalytic core with a-ketoglutarate==
-
[[http://www.uniprot.org/uniprot/RPH1_YEAST RPH1_YEAST]] Transcriptional repressor of photolyase PHR1. Recognizes and binds the sequence AG(4) in the upstream repressing sequence of PHR1. Derepresses PHR1 transcription when phosphorylated.<ref>PMID:10523651</ref> <ref>PMID:11809875</ref>
+
<StructureSection load='3opt' size='340' side='right'caption='[[3opt]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[3opt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OPT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OPT FirstGlance]. <br>
-
[[3opt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OPT OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
==Reference==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3opt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3opt OCA], [https://pdbe.org/3opt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3opt RCSB], [https://www.ebi.ac.uk/pdbsum/3opt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3opt ProSAT]</span></td></tr>
-
<ref group="xtra">PMID:021067515</ref><references group="xtra"/><references/>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RPH1_YEAST RPH1_YEAST] Transcriptional repressor of photolyase PHR1. Recognizes and binds the sequence AG(4) in the upstream repressing sequence of PHR1. Derepresses PHR1 transcription when phosphorylated.<ref>PMID:10523651</ref> <ref>PMID:11809875</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Chang, Y.]]
+
[[Category: Chang Y]]
-
[[Category: Ding, J.]]
+
[[Category: Ding J]]
-
[[Category: Tong, X.]]
+
[[Category: Tong X]]
-
[[Category: Wu, J.]]
+
[[Category: Wu J]]
-
[[Category: Zhou, J.]]
+
[[Category: Zhou J]]
-
[[Category: Catalytic core]]
+
-
[[Category: Histone demethylase]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Rph1]]
+

Current revision

Crystal structure of the Rph1 catalytic core with a-ketoglutarate

PDB ID 3opt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3opt"
Personal tools