This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3oms
From Proteopedia
(Difference between revisions)
m (Protected "3oms" [edit=sysop:move=sysop]) |
|||
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3oms| PDB=3oms | SCENE= }} | ||
| - | ===Putative 3-demethylubiquinone-9 3-methyltransferase, PhnB protein, from Bacillus cereus.=== | ||
| - | == | + | ==Putative 3-demethylubiquinone-9 3-methyltransferase, PhnB protein, from Bacillus cereus.== |
| - | [[3oms]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <StructureSection load='3oms' size='340' side='right' caption='[[3oms]], [[Resolution|resolution]] 1.90Å' scene=''> |
| - | [[Category: | + | == Structural highlights == |
| - | [[Category: Abdullah, J | + | <table><tr><td colspan='2'>[[3oms]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Baccr Baccr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OMS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OMS FirstGlance]. <br> |
| - | [[Category: Joachimiak, A | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> |
| - | [[Category: Li, H | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BC_2431 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226900 BACCR])</td></tr> |
| - | [[Category: Osipiuk, J | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3oms FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oms OCA], [http://pdbe.org/3oms PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3oms RCSB], [http://www.ebi.ac.uk/pdbsum/3oms PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3oms ProSAT]</span></td></tr> |
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/om/3oms_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3oms ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Baccr]] | ||
| + | [[Category: Abdullah, J]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Li, H]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Osipiuk, J]] | ||
[[Category: Glyoxalase family]] | [[Category: Glyoxalase family]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
[[Category: Methyltransferase]] | [[Category: Methyltransferase]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
Current revision
Putative 3-demethylubiquinone-9 3-methyltransferase, PhnB protein, from Bacillus cereus.
| |||||||||||
