4k39

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:08, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4k39| PDB=4k39 | SCENE= }}
 
-
===Native anSMEcpe with bound AdoMet and Cp18Cys peptide===
 
-
==Function==
+
==Native anSMEcpe with bound AdoMet and Cp18Cys peptide==
-
[[http://www.uniprot.org/uniprot/ANSME_CLOP1 ANSME_CLOP1]] Involved in 'Cys-type' sulfatase maturation under anaerobic conditions. Catalyzes the post-translational modification of cysteine ('Cys-51' in the arylsulfatase CPF_0221) into 3-oxoalanine (also known as C(alpha)-formylglycine (FGly)), by a free radical chemical mechanism initiated via the reductive cleavage of S-adenosyl-L-methionine (SAM). Is also able to oxidize a serine residue in a synthetic substrate to FGly in vitro, and in a serine variant of a Cys-type sulfatase in vivo, but this activity is not physiological.<ref>PMID:16766528</ref> <ref>PMID:17335281</ref> <ref>PMID:18408004</ref>
+
<StructureSection load='4k39' size='340' side='right'caption='[[4k39]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[4k39]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_perfringens_ATCC_13124 Clostridium perfringens ATCC 13124]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K39 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4K39 FirstGlance]. <br>
-
[[4k39]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_perfringens_atcc_13124 Clostridium perfringens atcc 13124]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K39 OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.783&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
-
==Reference==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4k39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k39 OCA], [https://pdbe.org/4k39 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4k39 RCSB], [https://www.ebi.ac.uk/pdbsum/4k39 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4k39 ProSAT]</span></td></tr>
-
<references group="xtra"/><references/>
+
</table>
-
[[Category: Clostridium perfringens atcc 13124]]
+
== Function ==
-
[[Category: Drennan, C L.]]
+
[https://www.uniprot.org/uniprot/ANSME_CLOP1 ANSME_CLOP1] Involved in 'Cys-type' sulfatase maturation under anaerobic conditions. Catalyzes the post-translational modification of cysteine ('Cys-51' in the arylsulfatase CPF_0221) into 3-oxoalanine (also known as C(alpha)-formylglycine (FGly)), by a free radical chemical mechanism initiated via the reductive cleavage of S-adenosyl-L-methionine (SAM). Is also able to oxidize a serine residue in a synthetic substrate to FGly in vitro, and in a serine variant of a Cys-type sulfatase in vivo, but this activity is not physiological.<ref>PMID:16766528</ref> <ref>PMID:17335281</ref> <ref>PMID:18408004</ref>
-
[[Category: Goldman, P J.]]
+
== References ==
-
[[Category: Adomet radical fold]]
+
<references/>
-
[[Category: Oxidoreductase]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Clostridium perfringens ATCC 13124]]
 +
[[Category: Large Structures]]
 +
[[Category: Drennan CL]]
 +
[[Category: Goldman PJ]]

Current revision

Native anSMEcpe with bound AdoMet and Cp18Cys peptide

PDB ID 4k39

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools