2gl8
From Proteopedia
(Difference between revisions)
(12 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | [[Image:2gl8.gif|left|200px]]<br /><applet load="2gl8" size="350" color="white" frame="true" align="right" spinBox="true" | ||
- | caption="2gl8, resolution 2.40Å" /> | ||
- | '''Human Retinoic acid receptor RXR-gamma ligand-binding domain'''<br /> | ||
- | == | + | ==Human Retinoic acid receptor RXR-gamma ligand-binding domain== |
- | + | <StructureSection load='2gl8' size='340' side='right'caption='[[2gl8]], [[Resolution|resolution]] 2.40Å' scene=''> | |
- | + | == Structural highlights == | |
- | [[ | + | <table><tr><td colspan='2'>[[2gl8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GL8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GL8 FirstGlance]. <br> |
- | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
- | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gl8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gl8 OCA], [https://pdbe.org/2gl8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gl8 RCSB], [https://www.ebi.ac.uk/pdbsum/2gl8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gl8 ProSAT]</span></td></tr> |
- | [ | + | </table> |
- | + | == Function == | |
- | + | [https://www.uniprot.org/uniprot/RXRG_HUMAN RXRG_HUMAN] Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes. The RAR/RXR heterodimers bind to the retinoic acid response elements (RARE) composed of tandem 5'-AGGTCA-3' sites known as DR1-DR5. The high affinity ligand for RXRs is 9-cis retinoic acid (By similarity). | |
- | [ | + | == Evolutionary Conservation == |
- | + | [[Image:Consurf_key_small.gif|200px|right]] | |
- | [ | + | Check<jmol> |
- | + | <jmolCheckbox> | |
- | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gl/2gl8_consurf.spt"</scriptWhenChecked> |
- | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
- | [[ | + | <text>to colour the structure by Evolutionary Conservation</text> |
- | + | </jmolCheckbox> | |
- | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gl8 ConSurf]. | |
+ | <div style="clear:both"></div> | ||
- | + | ==See Also== | |
+ | *[[Retinoid X receptor 3D structures|Retinoid X receptor 3D structures]] | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Homo sapiens]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Arrowsmith CH]] | ||
+ | [[Category: Bochkarev A]] | ||
+ | [[Category: Edwards AM]] | ||
+ | [[Category: Loppnau P]] | ||
+ | [[Category: Min JR]] | ||
+ | [[Category: Plotnikov AN]] | ||
+ | [[Category: Schuetz A]] | ||
+ | [[Category: Sundstrom M]] | ||
+ | [[Category: Weigelt J]] |
Current revision
Human Retinoic acid receptor RXR-gamma ligand-binding domain
|
Categories: Homo sapiens | Large Structures | Arrowsmith CH | Bochkarev A | Edwards AM | Loppnau P | Min JR | Plotnikov AN | Schuetz A | Sundstrom M | Weigelt J