3p0s
From Proteopedia
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| - | {{STRUCTURE_3p0s| PDB=3p0s | SCENE= }} | ||
| - | ===Crystal structure of Bombyx mori densovirus 1 capsid=== | ||
| - | {{ABSTRACT_PUBMED_21367906}} | ||
| - | == | + | ==Crystal structure of Bombyx mori densovirus 1 capsid== |
| - | [[3p0s]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3p0s' size='340' side='right'caption='[[3p0s]], [[Resolution|resolution]] 3.10Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3p0s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bombyx_mori_densovirus_1 Bombyx mori densovirus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P0S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3P0S FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1Å</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3p0s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p0s OCA], [https://pdbe.org/3p0s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3p0s RCSB], [https://www.ebi.ac.uk/pdbsum/3p0s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3p0s ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8V0M6_9VIRU Q8V0M6_9VIRU] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Bombyx mori densovirus 1 (BmDNV-1), a major pathogen of silk worms, causes significant losses to the silk industry. The structure of recombinant BmDNV-1 virus-like particle has been determined to 3.1 A resolution using X-ray crystallography. It is the first near-atomic resolution structure of a virus-like particle within the genus Iteravirus. The particles consist of 60 copies of the 55 kDa VP3 coat protein. The capsid protein has a beta-barrel "jelly roll" fold similar to that found in many diverse icosahedral viruses including archaea, bacterial, plant and animal viruses as well as other parvoviruses. Most of the surface loops have little structural resemblance to other known parvoviral capsid proteins. In contrast to vertebrate parvoviruses, the N-terminal beta-strand of the BmDNV-1 VP3 is positioned relative to the neighboring twofold related subunit in a "domain swapped" conformation, similar to other invertebrate parvoviruses, suggesting domain-swapping is an evolutionary conserved structural feature of the Densovirinae. | ||
| - | + | Structure of Bombyx mori Densovirus 1, a Silkworm Pathogen.,Kaufmann B, El-Far M, Plevka P, Bowman VD, Li Y, Tijssen P, Rossmann MG J Virol. 2011 Mar 2. PMID:21367906<ref>PMID:21367906</ref> | |
| - | <ref | + | |
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 3p0s" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Bombyx mori densovirus 1]] | [[Category: Bombyx mori densovirus 1]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Kaufmann B]] |
| - | [[Category: | + | [[Category: Rossmann MG]] |
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Current revision
Crystal structure of Bombyx mori densovirus 1 capsid
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