3rom

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{{STRUCTURE_3rom| PDB=3rom | SCENE= }}
 
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===Crystal structure of human CD38 in complex with compound CZ-48===
 
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{{ABSTRACT_PUBMED_22142305}}
 
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==Function==
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==Crystal structure of human CD38 in complex with compound CZ-48==
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[[http://www.uniprot.org/uniprot/CD38_HUMAN CD38_HUMAN]] Synthesizes cyclic ADP-ribose, a second messenger for glucose-induced insulin secretion. Also has cADPr hydrolase activity. Also moonlights as a receptor in cells of the immune system.
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<StructureSection load='3rom' size='340' side='right'caption='[[3rom]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3rom]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ROM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ROM FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=48Z:2-DEOXY-2-FLUORO-5-O-THIOPHOSPHONO-ALPHA-D-ARABINOFURANOSE'>48Z</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rom FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rom OCA], [https://pdbe.org/3rom PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rom RCSB], [https://www.ebi.ac.uk/pdbsum/3rom PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rom ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CD38_HUMAN CD38_HUMAN] Synthesizes cyclic ADP-ribose, a second messenger for glucose-induced insulin secretion. Also has cADPr hydrolase activity. Also moonlights as a receptor in cells of the immune system.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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CD38 is a signaling enzyme responsible for catalyzing the synthesis of cyclic ADP ribose (cADPR) and nicotinic acid adenine dinucleotide phosphate; both are universal Ca(2+) messenger molecules. Ablation of the CD38 gene in mice causes multiple physiological defects, including impaired oxytocin release, that result in altered social behavior. A series of catalysis-based inhibitors of CD38 were designed and synthesized, starting with arabinosyl-2'-fluoro-2'-deoxynicotinamide mononucleotide. Structure-function relationships were analyzed to assess the structural determinants important for inhibiting the NADase activity of CD38. X-ray crystallography was used to reveal the covalent intermediates that were formed with the catalytic residue, Glu226. Metabolically stable analogues that were resistant to inactivation by phosphatase and esterase were synthesized and shown to be effective in inhibiting intracellular cADPR production in human HL-60 cells during induction of differentiation by retinoic acid. The inhibition was species-independent, and the analogues were similarly effective in blocking the cyclization reaction of CD38 in rat ventricular tissue extracts, as well as inhibiting the alpha-agonist-induced constriction in rat mesentery arteries. These compounds thus represent the first generally applicable and catalysis-based inhibitors of the Ca(2+) signaling function of CD38.
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==About this Structure==
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Catalysis-Based Inhibitors of the Calcium Signaling Function of CD38.,Kwong AK, Chen Z, Zhang H, Leung FP, Lam CM, Ting KY, Zhang L, Hao Q, Zhang LH, Lee HC Biochemistry. 2011 Dec 14. PMID:22142305<ref>PMID:22142305</ref>
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[[3rom]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ROM OCA].
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==See Also==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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*[[Cluster of Differentiation 38|Cluster of Differentiation 38]]
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</div>
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<div class="pdbe-citations 3rom" style="background-color:#fffaf0;"></div>
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==Reference==
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==See Also==
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<ref group="xtra">PMID:022142305</ref><references group="xtra"/><references/>
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*[[Cluster of Differentiation CD38|Cluster of Differentiation CD38]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Hao, Q.]]
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[[Category: Large Structures]]
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[[Category: Lee, H C.]]
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[[Category: Hao Q]]
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[[Category: Zhang, H.]]
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[[Category: Lee HC]]
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[[Category: Adp-ribosyl cyclase]]
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[[Category: Zhang H]]
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[[Category: Calcium signaling]]
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[[Category: Cd38]]
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[[Category: Covalent intermediate]]
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[[Category: Cyclic adp-ribose]]
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[[Category: Cz-48]]
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[[Category: Hydrolase-hydrolase inhibitor complex]]
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[[Category: Inhibitory compound]]
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[[Category: X-crystallography]]
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Current revision

Crystal structure of human CD38 in complex with compound CZ-48

PDB ID 3rom

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