This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4koq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "4koq" [edit=sysop:move=sysop])
Current revision (12:14, 1 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 4koq is ON HOLD until Paper Publication
+
==Crystal Structure of WHY3 from Arabidopsis thaliana==
-
 
+
<StructureSection load='4koq' size='340' side='right'caption='[[4koq]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
Authors: Cappadocia, L., Parent, J.S., Brisson, N., Sygusch, J.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4koq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KOQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KOQ FirstGlance]. <br>
-
Description: Crystal Structure of WHY3 from Arabidopsis thaliana
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4koq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4koq OCA], [https://pdbe.org/4koq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4koq RCSB], [https://www.ebi.ac.uk/pdbsum/4koq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4koq ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/WHY3_ARATH WHY3_ARATH] Single-stranded DNA-binding protein that functions in both chloroplasts and nucleus. In chloroplasts, maintains plastid genome stability by preventing break-induced and short homology-dependent illegitimate recombinations. In the nucleus, is recruited to a distal element upstream of the kinesin KP1 to mediate the transcriptional repression of KP1. Can bind double-stranded DNA in vivo.<ref>PMID:19669906</ref> <ref>PMID:19666500</ref> <ref>PMID:20551348</ref> <ref>PMID:21911368</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Arabidopsis thaliana]]
 +
[[Category: Large Structures]]
 +
[[Category: Brisson N]]
 +
[[Category: Cappadocia L]]
 +
[[Category: Parent JS]]
 +
[[Category: Sygusch J]]

Current revision

Crystal Structure of WHY3 from Arabidopsis thaliana

PDB ID 4koq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4koq"
Personal tools