3vyo

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{{STRUCTURE_3vyo| PDB=3vyo | SCENE= }}
 
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===Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N140 truncation mutant (resideus 140-408)===
 
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==About this Structure==
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==Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N140 truncation mutant (resideus 140-408)==
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[[3vyo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYO OCA].
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<StructureSection load='3vyo' size='340' side='right'caption='[[3vyo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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== Structural highlights ==
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==Reference==
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<table><tr><td colspan='2'>[[3vyo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VYO FirstGlance]. <br>
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<ref group="xtra">PMID:023588382</ref><references group="xtra"/><references/>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vyo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vyo OCA], [https://pdbe.org/3vyo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vyo RCSB], [https://www.ebi.ac.uk/pdbsum/3vyo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vyo ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/LDT2_MYCTU LDT2_MYCTU] Generates 3->3 cross-links in peptidoglycan, catalyzing the cleavage of the mDap(3)-D-Ala(4) bond of a tetrapeptide donor stem and the formation of a bond between the carbonyl of mDap(3) of the donor stem and the side chain of mDap(3) of the acceptor stem. Is specific for donor substrates containing a stem tetrapeptide since it cannot use pentapeptide stems.<ref>PMID:24041897</ref>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Mycobacterium tuberculosis]]
[[Category: Mycobacterium tuberculosis]]
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[[Category: Peptidyltransferase]]
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[[Category: Bi LJ]]
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[[Category: Bi, L J.]]
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[[Category: Li DF]]
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[[Category: Li, D F.]]
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[[Category: Li WJ]]
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[[Category: Li, W J.]]
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[[Category: Wang DC]]
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[[Category: Wang, D C.]]
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[[Category: Beta barrel]]
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[[Category: Beta-lactam binding]]
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[[Category: D-transpeptidase]]
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[[Category: Transferase]]
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[[Category: Ykud domain]]
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Current revision

Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N140 truncation mutant (resideus 140-408)

PDB ID 3vyo

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