4g2d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:55, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4g2d| PDB=4g2d | SCENE= }}
 
-
===Crystal structure of the hyperthermophilic Sulfolobus islandicus PLL SisLac===
 
-
{{ABSTRACT_PUBMED_23071703}}
 
-
==About this Structure==
+
==Crystal structure of the hyperthermophilic Sulfolobus islandicus PLL SisLac==
-
[[4g2d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_islandicus_m.16.4 Sulfolobus islandicus m.16.4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4G2D OCA].
+
<StructureSection load='4g2d' size='340' side='right'caption='[[4g2d]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4g2d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfolobus_islandicus_M.16.4 Sulfolobus islandicus M.16.4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4G2D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4G2D FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4g2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4g2d OCA], [https://pdbe.org/4g2d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4g2d RCSB], [https://www.ebi.ac.uk/pdbsum/4g2d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4g2d ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/C4KKZ9_SULIK C4KKZ9_SULIK]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
BACKGROUND: A new member of the Phosphotriesterase-Like Lactonases (PLL) family from the hyperthermophilic archeon Sulfolobus islandicus (SisLac) has been characterized. SisLac is a native lactonase that exhibits a high promiscuous phosphotriesterase activity. SisLac thus represents a promising target for engineering studies, exhibiting both detoxification and bacterial quorum quenching abilities, including human pathogens such as Pseudomonas aeruginosa. METHODOLOGY/PRINCIPAL FINDINGS: Here, we describe the substrate specificity of SisLac, providing extensive kinetic studies performed with various phosphotriesters, esters, N-acyl-homoserine lactones (AHLs) and other lactones as substrates. Moreover, we solved the X-ray structure of SisLac and structural comparisons with the closely related SsoPox structure highlighted differences in the surface salt bridge network and the dimerization interface. SisLac and SsoPox being close homologues (91% sequence identity), we undertook a mutational study to decipher these structural differences and their putative consequences on the stability and the catalytic properties of these proteins. CONCLUSIONS/SIGNIFICANCE: We show that SisLac is a very proficient lactonase against aroma lactones and AHLs as substrates. Hence, data herein emphasize the potential role of SisLac as quorum quenching agent in Sulfolobus. Moreover, despite the very high sequence homology with SsoPox, we highlight key epistatic substitutions that influence the enzyme stability and activity.
-
==Reference==
+
Structural and enzymatic characterization of the lactonase SisLac from Sulfolobus islandicus.,Hiblot J, Gotthard G, Chabriere E, Elias M PLoS One. 2012;7(10):e47028. doi: 10.1371/journal.pone.0047028. Epub 2012 Oct 10. PMID:23071703<ref>PMID:23071703</ref>
-
<ref group="xtra">PMID:023071703</ref><references group="xtra"/><references/>
+
 
-
[[Category: Aryldialkylphosphatase]]
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Sulfolobus islandicus m 16 4]]
+
</div>
-
[[Category: Chabriere, E.]]
+
<div class="pdbe-citations 4g2d" style="background-color:#fffaf0;"></div>
-
[[Category: Elias, M.]]
+
== References ==
-
[[Category: Gotthard, G.]]
+
<references/>
-
[[Category: Hiblot, J.]]
+
__TOC__
-
[[Category: Bioscavenger]]
+
</StructureSection>
-
[[Category: Hydrolase]]
+
[[Category: Large Structures]]
-
[[Category: Hyperthermophilic]]
+
[[Category: Sulfolobus islandicus M 16 4]]
-
[[Category: Lactonase]]
+
[[Category: Chabriere E]]
-
[[Category: Lysine nz-carboxylic acid]]
+
[[Category: Elias M]]
-
[[Category: Phosphotriesterase]]
+
[[Category: Gotthard G]]
-
[[Category: Phosphotriesterase-like lactonase]]
+
[[Category: Hiblot J]]
-
[[Category: Promiscuous activity]]
+
-
[[Category: Quorum sensing]]
+
-
[[Category: Quorum-quenching]]
+

Current revision

Crystal structure of the hyperthermophilic Sulfolobus islandicus PLL SisLac

PDB ID 4g2d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools