4j19
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_4j19| PDB=4j19 | SCENE= }} | ||
| - | ===Structure of a novel telomere repeat binding protein bound to DNA=== | ||
| - | {{ABSTRACT_PUBMED_23685356}} | ||
| - | == | + | ==Structure of a novel telomere repeat binding protein bound to DNA== |
| - | [[http://www.uniprot.org/uniprot/HMBX1_HUMAN HMBX1_HUMAN | + | <StructureSection load='4j19' size='340' side='right'caption='[[4j19]], [[Resolution|resolution]] 2.90Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4j19]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J19 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4J19 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4j19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j19 OCA], [https://pdbe.org/4j19 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4j19 RCSB], [https://www.ebi.ac.uk/pdbsum/4j19 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4j19 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/HMBX1_HUMAN HMBX1_HUMAN] Transcription factor. Isoform 1 acts as a transcriptional repressor. Isoform 4 has very low activity as a transcriptional repressor.<ref>PMID:16825764</ref> <ref>PMID:19757162</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Telomeres are repetitive DNA structures that, together with the shelterin and the CST complex, protect the ends of chromosomes. Telomere shortening is mitigated in stem and cancer cells through the de novo addition of telomeric repeats by telomerase. Telomere elongation requires the delivery of the telomerase complex to telomeres through a not yet fully understood mechanism. Factors promoting telomerase-telomere interaction are expected to directly bind telomeres and physically interact with the telomerase complex. In search for such a factor we carried out a SILAC-based DNA-protein interaction screen and identified HMBOX1, hereafter referred to as homeobox telomere-binding protein 1 (HOT1). HOT1 directly and specifically binds double-stranded telomere repeats, with the in vivo association correlating with binding to actively processed telomeres. Depletion and overexpression experiments classify HOT1 as a positive regulator of telomere length. Furthermore, immunoprecipitation and cell fractionation analyses show that HOT1 associates with the active telomerase complex and promotes chromatin association of telomerase. Collectively, these findings suggest that HOT1 supports telomerase-dependent telomere elongation. | ||
| - | + | HOT1 is a mammalian direct telomere repeat-binding protein contributing to telomerase recruitment.,Kappei D, Butter F, Benda C, Scheibe M, Draskovic I, Stevense M, Novo CL, Basquin C, Araki M, Araki K, Krastev DB, Kittler R, Jessberger R, Londono-Vallejo JA, Mann M, Buchholz F EMBO J. 2013 May 17. doi: 10.1038/emboj.2013.105. PMID:23685356<ref>PMID:23685356</ref> | |
| - | + | ||
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | < | + | </div> |
| + | <div class="pdbe-citations 4j19" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: Basquin | + | [[Category: Large Structures]] |
| - | [[Category: Benda | + | [[Category: Basquin C]] |
| - | [[Category: Buchholz | + | [[Category: Benda C]] |
| - | [[Category: Butter | + | [[Category: Buchholz F]] |
| - | [[Category: Draskovic | + | [[Category: Butter F]] |
| - | [[Category: Jessberger | + | [[Category: Draskovic I]] |
| - | [[Category: Kappei | + | [[Category: Jessberger R]] |
| - | [[Category: Kittler | + | [[Category: Kappei D]] |
| - | [[Category: Krastev | + | [[Category: Kittler R]] |
| - | [[Category: Londono-Vallejo | + | [[Category: Krastev DB]] |
| - | [[Category: | + | [[Category: Londono-Vallejo AJ]] |
| - | [[Category: | + | [[Category: Lopes Novo C]] |
| - | [[Category: Scheibe | + | [[Category: Mann M]] |
| - | [[Category: Stevense | + | [[Category: Scheibe M]] |
| - | + | [[Category: Stevense M]] | |
| - | + | ||
| - | + | ||
Current revision
Structure of a novel telomere repeat binding protein bound to DNA
| |||||||||||
Categories: Homo sapiens | Large Structures | Basquin C | Benda C | Buchholz F | Butter F | Draskovic I | Jessberger R | Kappei D | Kittler R | Krastev DB | Londono-Vallejo AJ | Lopes Novo C | Mann M | Scheibe M | Stevense M
