4l2z

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(New page: {{STRUCTURE_4l2z| PDB=4l2z | SCENE= }} ===Crystal structure of S-Adenosylmethionine synthetase from Sulfolobus solfataricus complexed with SAE and PPi=== ==About this Structure== [[4...)
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{{STRUCTURE_4l2z| PDB=4l2z | SCENE= }}
 
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===Crystal structure of S-Adenosylmethionine synthetase from Sulfolobus solfataricus complexed with SAE and PPi===
 
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==About this Structure==
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==Crystal structure of S-Adenosylmethionine synthetase from Sulfolobus solfataricus complexed with SAE and PPi==
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[[4l2z]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus_p2 Sulfolobus solfataricus p2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L2Z OCA].
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<StructureSection load='4l2z' size='340' side='right'caption='[[4l2z]], [[Resolution|resolution]] 2.49&Aring;' scene=''>
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[[Category: Methionine adenosyltransferase]]
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== Structural highlights ==
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[[Category: Sulfolobus solfataricus p2]]
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<table><tr><td colspan='2'>[[4l2z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L2Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4L2Z FirstGlance]. <br>
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[[Category: Bingman, C A.]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.494&#8491;</td></tr>
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[[Category: Helmich, K E.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DPO:DIPHOSPHATE'>DPO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=S7M:[(3S)-3-AMINO-3-CARBOXYPROPYL]{[(2S,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL}ETHYLSULFONIUM'>S7M</scene></td></tr>
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[[Category: Hurley, K A.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4l2z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l2z OCA], [https://pdbe.org/4l2z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4l2z RCSB], [https://www.ebi.ac.uk/pdbsum/4l2z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4l2z ProSAT]</span></td></tr>
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[[Category: NatPro, Enzyme Discovery for Natural Product Biosynthesis.]]
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</table>
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[[Category: Phillips, G N.]]
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== Function ==
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[[Category: Singh, S.]]
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[https://www.uniprot.org/uniprot/METK_SACS2 METK_SACS2] Catalyzes the formation of S-adenosylmethionine from methionine and ATP.[HAMAP-Rule:MF_00136]
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[[Category: Thorson, J S.]]
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<div style="background-color:#fffaf0;">
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[[Category: Wang, F.]]
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== Publication Abstract from PubMed ==
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[[Category: Enzyme discovery for natural product biosynthesis]]
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SMNF: Methionine adenosyltransferase (MAT) is a family of enzymes that utilizes ATP and methionine to produce S-adenosylmethionine (AdoMet), the most crucial methyl donor in the biological methylation of biomolecules and bioactive natural products. Here, we report that the MAT from Sulfolobus solfataricus (sMAT), an enzyme from a poorly explored class of the MAT family, has the ability to produce a range of differentially alkylated AdoMet analogs in the presence of non-native methionine analogs and ATP. To investigate the molecular basis for AdoMet analog production, we have crystallized the sMAT in the AdoMet bound, S-adenosylethionine (AdoMet) bound, and unbound forms. Notably, among these structures, the AdoEth-bound form offers the first MAT structure containing a non-native product and cumulatively, these structures add new structural insight into the MAT family and allow for detailed active site comparison with its homologs in E. coli and human. As a thermostable MAT structure from archaea, the structures herein also provide as a basis for future engineering to potentially broaden AdoMet analog production as reagents for methyltransferase-catalyzed 'alkylrandomization' and/or the study of methylation in the context of biological processes. STRUCTURED DIGITAL ABSTRACT: sMAT and sMAT bind by x-ray crystallography (View interaction).
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[[Category: Natpro]]
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[[Category: Protein structure initiative]]
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Understanding Molecular Recognition of Promiscuity of Thermophilic Methionine Adenosyltransferase, sMAT from Sulfolobus solfataricus.,Wang F, Singh S, Zhang J, Huber TD, Helmich KE, Sunkara M, Hurley KA, Goff RD, Bingman CA, Morris AJ, Thorson JS, Phillips GN Jr FEBS J. 2014 Mar 20. doi: 10.1111/febs.12784. PMID:24649856<ref>PMID:24649856</ref>
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[[Category: Psi-biology]]
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[[Category: S-adenosylmethionine synthase]]
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Structural genomic]]
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</div>
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[[Category: Transferase]]
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<div class="pdbe-citations 4l2z" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[S-adenosylmethionine synthetase 3D structures|S-adenosylmethionine synthetase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Saccharolobus solfataricus P2]]
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[[Category: Bingman CA]]
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[[Category: Helmich KE]]
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[[Category: Hurley KA]]
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[[Category: Phillips Jr GN]]
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[[Category: Singh S]]
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[[Category: Thorson JS]]
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[[Category: Wang F]]

Current revision

Crystal structure of S-Adenosylmethionine synthetase from Sulfolobus solfataricus complexed with SAE and PPi

PDB ID 4l2z

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