This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2hsb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:46, 25 January 2023) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2hsb.gif|left|200px]]<br /><applet load="2hsb" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2hsb, resolution 1.95&Aring;" />
 
-
'''Crystal structure of a protein of unknown function from DUF103 family (NP_069135.1) from Archaeoglobus Fulgidus at 1.95 A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of a hepn domain containing protein (af_0298) from archaeoglobus fulgidus at 1.95 A resolution==
-
2HSB is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus] with <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=PG4:'>PG4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HSB OCA].
+
<StructureSection load='2hsb' size='340' side='right'caption='[[2hsb]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2hsb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HSB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HSB FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hsb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hsb OCA], [https://pdbe.org/2hsb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hsb RCSB], [https://www.ebi.ac.uk/pdbsum/2hsb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hsb ProSAT], [https://www.topsan.org/Proteins/JCSG/2hsb TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Y298_ARCFU Y298_ARCFU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hs/2hsb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hsb ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Archaeoglobus fulgidus]]
[[Category: Archaeoglobus fulgidus]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
-
[[Category: PG4]]
+
-
[[Category: SO4]]
+
-
[[Category: hypothetical protein]]
+
-
[[Category: jcsg]]
+
-
[[Category: joint center for structural genomics]]
+
-
[[Category: np_069135 1]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomics]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:45:16 2008''
+

Current revision

Crystal structure of a hepn domain containing protein (af_0298) from archaeoglobus fulgidus at 1.95 A resolution

PDB ID 2hsb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools