2qtk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:17, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_2qtk| PDB=2qtk | SCENE= }}
 
-
===Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa===
 
-
{{ABSTRACT_PUBMED_18611376}}
 
-
==About this Structure==
+
==Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa==
-
[[2qtk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QTK OCA].
+
<StructureSection load='2qtk' size='340' side='right'caption='[[2qtk]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2qtk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QTK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QTK FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qtk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qtk OCA], [https://pdbe.org/2qtk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qtk RCSB], [https://www.ebi.ac.uk/pdbsum/2qtk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qtk ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9HUR5_PSEAE Q9HUR5_PSEAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qt/2qtk_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qtk ConSurf].
 +
<div style="clear:both"></div>
-
==Reference==
+
==See Also==
-
<ref group="xtra">PMID:018611376</ref><references group="xtra"/><references/>
+
*[[Porin 3D structures|Porin 3D structures]]
-
[[Category: Pseudomonas aeruginosa]]
+
__TOC__
-
[[Category: Berg, B Van den.]]
+
</StructureSection>
-
[[Category: Biswas, S.]]
+
[[Category: Large Structures]]
-
[[Category: Beta barrel]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Membrane protein]]
+
[[Category: Biswas S]]
-
[[Category: Outer membrane protein]]
+
[[Category: Van den Berg B]]
-
[[Category: Porin]]
+
-
[[Category: Vanillate transport]]
+

Current revision

Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa

PDB ID 2qtk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools