2hwu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:34, 14 February 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2hwu.jpg|left|200px]]<br /><applet load="2hwu" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2hwu, resolution 2.91&Aring;" />
 
-
'''Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with uridine and phosphate ion at 2.91A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with uridine and phosphate ion at 2.91A resolution==
-
2HWU is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium] with <scene name='pdbligand=PO4:'>PO4</scene> and <scene name='pdbligand=URI:'>URI</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Uridine_phosphorylase Uridine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.3 2.4.2.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HWU OCA].
+
<StructureSection load='2hwu' size='340' side='right'caption='[[2hwu]], [[Resolution|resolution]] 2.91&Aring;' scene=''>
-
[[Category: Salmonella typhimurium]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2hwu]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HWU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HWU FirstGlance]. <br>
-
[[Category: Uridine phosphorylase]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.91&#8491;</td></tr>
-
[[Category: Dontsova, M V.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=URI:URIDINE'>URI</scene></td></tr>
-
[[Category: Gabdulkhakov, A G.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hwu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hwu OCA], [https://pdbe.org/2hwu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hwu RCSB], [https://www.ebi.ac.uk/pdbsum/2hwu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hwu ProSAT]</span></td></tr>
-
[[Category: Mikhailov, A M.]]
+
</table>
-
[[Category: Timofeev, V I.]]
+
== Function ==
-
[[Category: PO4]]
+
[https://www.uniprot.org/uniprot/UDP_SALTY UDP_SALTY] Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (By similarity).
-
[[Category: URI]]
+
== Evolutionary Conservation ==
-
[[Category: nucleoside phosphorylase]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: transferase]]
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hw/2hwu_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hwu ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:46:35 2008''
+
==See Also==
 +
*[[Uridine phosphorylase 3D structures|Uridine phosphorylase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
 +
[[Category: Dontsova MV]]
 +
[[Category: Gabdulkhakov AG]]
 +
[[Category: Mikhailov AM]]
 +
[[Category: Timofeev VI]]

Current revision

Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with uridine and phosphate ion at 2.91A resolution

PDB ID 2hwu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools