This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2i3f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:05, 30 August 2023) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2i3f.gif|left|200px]]<br /><applet load="2i3f" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2i3f, resolution 1.380&Aring;" />
 
-
'''Crystal Structure of a Glycolipid transfer-like protein from Galdieria sulphuraria'''<br />
 
-
==About this Structure==
+
==Crystal Structure of a Glycolipid transfer-like protein from Galdieria sulphuraria==
-
2I3F is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Galdieria_sulphuraria Galdieria sulphuraria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3F OCA].
+
<StructureSection load='2i3f' size='340' side='right'caption='[[2i3f]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2i3f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Galdieria_sulphuraria Galdieria sulphuraria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I3F FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.38&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i3f OCA], [https://pdbe.org/2i3f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i3f RCSB], [https://www.ebi.ac.uk/pdbsum/2i3f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i3f ProSAT], [https://www.topsan.org/Proteins/CESG/2i3f TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i3/2i3f_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i3f ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Galdieria sulphuraria]]
[[Category: Galdieria sulphuraria]]
-
[[Category: Protein complex]]
+
[[Category: Large Structures]]
-
[[Category: Bingman, C A.]]
+
[[Category: Bingman CA]]
-
[[Category: Bitto, E.]]
+
[[Category: Bitto E]]
-
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
+
[[Category: McCoy JG]]
-
[[Category: Jr., G N.Phillips.]]
+
[[Category: Phillips Jr GN]]
-
[[Category: McCoy, J G.]]
+
[[Category: Wesenberg GE]]
-
[[Category: Wesenberg, G E.]]
+
-
[[Category: center for eukaryotic structural genomics]]
+
-
[[Category: cesg]]
+
-
[[Category: gltp superfamily]]
+
-
[[Category: gltp-like]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:48:45 2008''
+

Current revision

Crystal Structure of a Glycolipid transfer-like protein from Galdieria sulphuraria

PDB ID 2i3f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools