2i6d
From Proteopedia
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| - | [[Image:2i6d.gif|left|200px]]<br /><applet load="2i6d" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2i6d, resolution 1.85Å" /> | ||
| - | '''The structure of a putative RNA methyltransferase of the TrmH family from Porphyromonas gingivalis.'''<br /> | ||
| - | == | + | ==The structure of a putative RNA methyltransferase of the TrmH family from Porphyromonas gingivalis.== |
| - | + | <StructureSection load='2i6d' size='340' side='right'caption='[[2i6d]], [[Resolution|resolution]] 1.85Å' scene=''> | |
| - | [[Category: | + | == Structural highlights == |
| - | [[Category: | + | <table><tr><td colspan='2'>[[2i6d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porgi Porgi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I6D FirstGlance]. <br> |
| - | [[Category: Cuff, M E | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene></td></tr> |
| - | [[Category: Joachimiak, A | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: Li, H | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SpoU, PG_0744 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=242619 PORGI])</td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i6d OCA], [https://pdbe.org/2i6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i6d RCSB], [https://www.ebi.ac.uk/pdbsum/2i6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i6d ProSAT], [https://www.topsan.org/Proteins/MCSG/2i6d TOPSAN]</span></td></tr> |
| - | [[Category: Moy, S | + | </table> |
| - | [[Category: Mussar, K E | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i6/2i6d_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | [[Category: | + | </jmolCheckbox> |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i6d ConSurf]. | |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | + | [[Category: Large Structures]] | |
| - | + | [[Category: Porgi]] | |
| + | [[Category: Cuff, M E]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Li, H]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Moy, S]] | ||
| + | [[Category: Mussar, K E]] | ||
| + | [[Category: Knot]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: Porphyromonas gingivali]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Rna methyltransferase]] | ||
| + | [[Category: Stuctural genomic]] | ||
| + | [[Category: Transferase]] | ||
| + | [[Category: Trmh family]] | ||
Current revision
The structure of a putative RNA methyltransferase of the TrmH family from Porphyromonas gingivalis.
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