2i6h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:29, 24 March 2021) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2i6h.gif|left|200px]]<br /><applet load="2i6h" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2i6h, resolution 1.75&Aring;" />
 
-
'''Structure of Protein of Unknown Function ATU0120 from Agrobacterium tumefaciens'''<br />
 
-
==About this Structure==
+
==Structure of Protein of Unknown Function ATU0120 from Agrobacterium tumefaciens==
-
2I6H is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens] with <scene name='pdbligand=CA:'>CA</scene> and <scene name='pdbligand=CL:'>CL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I6H OCA].
+
<StructureSection load='2i6h' size='340' side='right'caption='[[2i6h]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-
[[Category: Agrobacterium tumefaciens]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2i6h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I6H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I6H FirstGlance]. <br>
-
[[Category: Edwards, A.]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
[[Category: Gu, J.]]
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Joachimiak, A.]]
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Atu0120 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i6h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i6h OCA], [https://pdbe.org/2i6h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i6h RCSB], [https://www.ebi.ac.uk/pdbsum/2i6h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i6h ProSAT], [https://www.topsan.org/Proteins/MCSG/2i6h TOPSAN]</span></td></tr>
-
[[Category: Osipiuk, J.]]
+
</table>
-
[[Category: Savchenko, A.]]
+
== Evolutionary Conservation ==
-
[[Category: Xu, X.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: CA]]
+
Check<jmol>
-
[[Category: CL]]
+
<jmolCheckbox>
-
[[Category: apc5905]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i6/2i6h_consurf.spt"</scriptWhenChecked>
-
[[Category: mcsg]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: midwest center for structural genomics]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: protein structure initiative]]
+
</jmolCheckbox>
-
[[Category: psi-2]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i6h ConSurf].
-
[[Category: structural genomics]]
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:49:42 2008''
+
</StructureSection>
 +
[[Category: Agrfc]]
 +
[[Category: Large Structures]]
 +
[[Category: Edwards, A]]
 +
[[Category: Gu, J]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Osipiuk, J]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Xu, X]]
 +
[[Category: Apc5905]]
 +
[[Category: Mcsg]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Unknown function]]

Current revision

Structure of Protein of Unknown Function ATU0120 from Agrobacterium tumefaciens

PDB ID 2i6h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools