4kbb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:09, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4kbb| PDB=4kbb | SCENE= }}
 
-
===Structure of Botulinum neurotoxin B binding domain in complex with both synaptotagmin II and GD1a===
 
-
==Function==
+
==Structure of Botulinum neurotoxin B binding domain in complex with both synaptotagmin II and GD1a==
-
[[http://www.uniprot.org/uniprot/BXB_CLOBO BXB_CLOBO]] Botulinum toxin acts by inhibiting neurotransmitter release. It binds to peripheral neuronal synapses, is internalized and moves by retrograde transport up the axon into the spinal cord where it can move between postsynaptic and presynaptic neurons. It inhibits neurotransmitter release by acting as a zinc endopeptidase that cleaves the '76-Gln-|-Phe-77' bond of synaptobrevin-2. [[http://www.uniprot.org/uniprot/SYT2_MOUSE SYT2_MOUSE]] May have a regulatory role in the membrane interactions during trafficking of synaptic vesicles at the active zone of the synapse. It binds acidic phospholipids with a specificity that requires the presence of both an acidic head group and a diacyl backbone.
+
<StructureSection load='4kbb' size='340' side='right'caption='[[4kbb]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4kbb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_botulinum Clostridium botulinum] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KBB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KBB FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kbb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kbb OCA], [https://pdbe.org/4kbb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kbb RCSB], [https://www.ebi.ac.uk/pdbsum/4kbb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kbb ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BXB_CLOBO BXB_CLOBO] Botulinum toxin acts by inhibiting neurotransmitter release. It binds to peripheral neuronal synapses, is internalized and moves by retrograde transport up the axon into the spinal cord where it can move between postsynaptic and presynaptic neurons. It inhibits neurotransmitter release by acting as a zinc endopeptidase that cleaves the '76-Gln-|-Phe-77' bond of synaptobrevin-2.
-
==About this Structure==
+
==See Also==
-
[[4kbb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_botulinum Clostridium botulinum] and [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KBB OCA].
+
*[[Botulinum neurotoxin 3D structures|Botulinum neurotoxin 3D structures]]
-
[[Category: Bontoxilysin]]
+
*[[Synaptotagmin 3D structures|Synaptotagmin 3D structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Clostridium botulinum]]
[[Category: Clostridium botulinum]]
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Berntsson, R P.A.]]
+
[[Category: Berntsson RPA]]
-
[[Category: Dong, M.]]
+
[[Category: Dong M]]
-
[[Category: Peng, L.]]
+
[[Category: Peng L]]
-
[[Category: Stenmark, P.]]
+
[[Category: Stenmark P]]
-
[[Category: Signaling protein-toxin complex]]
+
-
[[Category: Synaptotagmin and ganglioside]]
+
-
[[Category: Toxin binding domain]]
+

Current revision

Structure of Botulinum neurotoxin B binding domain in complex with both synaptotagmin II and GD1a

PDB ID 4kbb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools