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- | [[Image:3pih.png|left|200px|thumb|Crystal structure of UvrA complex with DNA, pyrophosphate and Zn+2 ion [[3pih]]]]
| + | <StructureSection load='3pih' size='340' side='right' caption='UvrA complex with DNA, pyrophosphate and Zn+2 ion (grey) [[3pih]]' scene='53/536710/Cv/3' > |
- | {{STRUCTURE_3pih| PDB=3pih | SIZE=400| SCENE= |right|CAPTION= UvrA complex with DNA, pyrophosphate and Zn+2 ion [[3pih]] }}
| + | == Function == |
| + | '''UvrABC''' endonuclease is an ''E. coli'' enzyme complex involved in DNA repair. UvrABC removes 12 nucleotides around a DNA mutation replacing them with the correct one<ref>PMID:11004168</ref>.<br /> |
| + | * '''UvrA''' is the protein which locates the DNA damage<ref>PMID:21240268</ref>.<br /> |
| + | * '''UvrB''' is involved in distinguishing damaged from undamaged DNA<ref>PMID:10946234</ref>.<br /> |
| + | * The C-terminal region of '''UvrC''' is involved in DNA binding and incisions at the 5'-side of a DNA damage during nucleotide excision repair<ref>PMID:9421501</ref>. |
| + | * '''UvrD''' is '''DNA helicase II'''. See [[Helicase]]. |
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| + | For details on the UvrA-UvrB complex see [[UvrA-UvrB interaction domains]]. |
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- | | + | == Structural highlights == |
- | | + | UvrA contains several domains: <scene name='53/536710/Cv/2'>UvrB-binding, DNA-binding and two ATP-binding domains</scene><ref>PMID:21240268</ref>. |
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- | '''UvrABC''' endonuclease is an E. coli enzyme complex involved in DNA repair. UvrABC removes 12 nucleotides around a DNA mutation replacing them with the correct one. For details on the UvrA-UvrB complex see [[UvrA-UvrB interaction domains]]. | + | |
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| ==3D structures of UvrABC== | | ==3D structures of UvrABC== |
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- | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
| + | [[UvrABC 3D structures]] |
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- | ===UvrA===
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- | [[3pih]] – TmUvrA + DNA – ''Thermotoga maritima'' <br /> | + | |
- | [[3zqj]] – UvrA – ''Mycobacterium tuberculosis''<br />
| + | |
- | [[4dfc]] – EcUvrA + Transcription-repair-coupling factor – ''Escherichia coli'' <br />
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- | ===UvrB===
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- | [[1d2m]], [[1c4o]] – UvrB – ''Thermus thermophilus'' <br />
| + | |
- | [[1d9x]] – BcUvrB – ''Bacillus caldotenax'' <br />
| + | |
- | [[1t5l]] – BcUvrB (mutant) <br />
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- | [[1qoj]] – EcUvrB C terminal <br />
| + | |
- | [[1d9z]] – BcUvrB + ATP <br />
| + | |
- | [[2fdc]] – BcUvrB + DNA <br />
| + | |
- | [[2d7d]], [[2nmv]], [[3v4r]] – BsUvrB + DNA – ''Bacillus subtilis'' <br />
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- | ===UvrC===
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- | [[1kft]] – EcUvrC C terminal <br />
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- | [[2nrr]], [[2nrt]], [[2nrv]], [[2nrw]], [[2nrx]], [[2nrz]] – TmUvrC C terminal <br />
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- | [[1ycz]], [[1yd0]], [[1yd1]] – TmUvrC N terminal <br />
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- | [[1yd2]], [[1yd3]], [[1yd4]], [[1yd5]] – TmUvrC N terminal (mutant)<br />
| + | |
- | [[1yd6]] – BcUvrC N terminal <br />
| + | |
- | [[3c65]] – BstUvrC – ''Bacillus stearothermophilus'' <br />
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- | ===UvrA-UvrB===
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- | [[3fpn]] – BstUvrA + UvrB <br />
| + | ==References== |
| + | <references /> |
| + | </StructureSection> |
| [[Category:Topic Page]] | | [[Category:Topic Page]] |
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Function
UvrABC endonuclease is an E. coli enzyme complex involved in DNA repair. UvrABC removes 12 nucleotides around a DNA mutation replacing them with the correct one[1].
- UvrA is the protein which locates the DNA damage[2].
- UvrB is involved in distinguishing damaged from undamaged DNA[3].
- The C-terminal region of UvrC is involved in DNA binding and incisions at the 5'-side of a DNA damage during nucleotide excision repair[4].
- UvrD is DNA helicase II. See Helicase.
For details on the UvrA-UvrB complex see UvrA-UvrB interaction domains.
Structural highlights
UvrA contains several domains: [5].
3D structures of UvrABC
UvrABC 3D structures
References
- ↑ Moolenaar GF, Moorman C, Goosen N. Role of the Escherichia coli nucleotide excision repair proteins in DNA replication. J Bacteriol. 2000 Oct;182(20):5706-14. PMID:11004168
- ↑ Jaciuk M, Nowak E, Skowronek K, Tanska A, Nowotny M. Structure of UvrA nucleotide excision repair protein in complex with modified DNA. Nat Struct Mol Biol. 2011 Feb;18(2):191-7. Epub 2011 Jan 16. PMID:21240268 doi:10.1038/nsmb.1973
- ↑ Theis K, Skorvaga M, Machius M, Nakagawa N, Van Houten B, Kisker C. The nucleotide excision repair protein UvrB, a helicase-like enzyme with a catch. Mutat Res. 2000 Aug 30;460(3-4):277-300. PMID:10946234
- ↑ Moolenaar GF, Uiterkamp RS, Zwijnenburg DA, Goosen N. The C-terminal region of the Escherichia coli UvrC protein, which is homologous to the C-terminal region of the human ERCC1 protein, is involved in DNA binding and 5'-incision. Nucleic Acids Res. 1998 Jan 15;26(2):462-8. PMID:9421501
- ↑ Jaciuk M, Nowak E, Skowronek K, Tanska A, Nowotny M. Structure of UvrA nucleotide excision repair protein in complex with modified DNA. Nat Struct Mol Biol. 2011 Feb;18(2):191-7. Epub 2011 Jan 16. PMID:21240268 doi:10.1038/nsmb.1973
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