2ijc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:17, 31 March 2021) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ijc.jpg|left|200px]]<br /><applet load="2ijc" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2ijc, resolution 2.05&Aring;" />
 
-
'''Structure of a Conserved Protein of Unknown Function PA0269 from Pseudomonas aeruginosa'''<br />
 
-
==About this Structure==
+
==Structure of a Conserved Protein of Unknown Function PA0269 from Pseudomonas aeruginosa==
-
2IJC is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IJC OCA].
+
<StructureSection load='2ijc' size='340' side='right'caption='[[2ijc]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
[[Category: Pseudomonas aeruginosa]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2ijc]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IJC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IJC FirstGlance]. <br>
-
[[Category: Binkowski, T A.]]
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Edwards, A.]]
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PA0269 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
-
[[Category: Joachimiak, A.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ijc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ijc OCA], [https://pdbe.org/2ijc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ijc RCSB], [https://www.ebi.ac.uk/pdbsum/2ijc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ijc ProSAT], [https://www.topsan.org/Proteins/MCSG/2ijc TOPSAN]</span></td></tr>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</table>
-
[[Category: Savchenko, A.]]
+
== Function ==
-
[[Category: Xu, X.]]
+
[[https://www.uniprot.org/uniprot/Q9I6M1_PSEAE Q9I6M1_PSEAE]] Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity.[SAAS:SAAS00088543]
-
[[Category: hypothetical protein]]
+
== Evolutionary Conservation ==
-
[[Category: mcsg]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: midwest center for structural genomics]]
+
Check<jmol>
-
[[Category: protein structure initiative]]
+
<jmolCheckbox>
-
[[Category: psi-2]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/2ijc_consurf.spt"</scriptWhenChecked>
-
[[Category: structural genomics]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:53:19 2008''
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ijc ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Pseae]]
 +
[[Category: Binkowski, T A]]
 +
[[Category: Edwards, A]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Xu, X]]
 +
[[Category: Hypothetical protein]]
 +
[[Category: Mcsg]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Unknown function]]

Current revision

Structure of a Conserved Protein of Unknown Function PA0269 from Pseudomonas aeruginosa

PDB ID 2ijc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools