This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ejx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:49, 13 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_2ejx| PDB=2ejx | SCENE= }}
 
-
===Crystal structure of the hypothetical protein STK_08120 from Sulfolobus tokodaii===
 
-
{{ABSTRACT_PUBMED_23836863}}
 
-
==About this Structure==
+
==Crystal structure of the hypothetical protein STK_08120 from Sulfolobus tokodaii==
-
[[2ejx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EJX OCA].
+
<StructureSection load='2ejx' size='340' side='right'caption='[[2ejx]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[2ejx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EJX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EJX FirstGlance]. <br>
-
<ref group="xtra">PMID:023836863</ref><references group="xtra"/><references/>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
-
[[Category: Sulfolobus tokodaii str. 7]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ejx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ejx OCA], [https://pdbe.org/2ejx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ejx RCSB], [https://www.ebi.ac.uk/pdbsum/2ejx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ejx ProSAT]</span></td></tr>
-
[[Category: Hatano, K.]]
+
</table>
-
[[Category: Miyakawa, T.]]
+
== Function ==
-
[[Category: Miyazono, K.]]
+
[https://www.uniprot.org/uniprot/Q973T5_SULTO Q973T5_SULTO]
-
[[Category: Nagata, K.]]
+
== Evolutionary Conservation ==
-
[[Category: Sawano, Y.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Tanokura, M.]]
+
Check<jmol>
-
[[Category: Arcaea]]
+
<jmolCheckbox>
-
[[Category: National project on protein structural and functional analyse]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ej/2ejx_consurf.spt"</scriptWhenChecked>
-
[[Category: Nppsfa]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Stk_08120]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Structural genomic]]
+
</jmolCheckbox>
-
[[Category: Unknown function]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ejx ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Sulfurisphaera tokodaii str. 7]]
 +
[[Category: Hatano K]]
 +
[[Category: Miyakawa T]]
 +
[[Category: Miyazono K]]
 +
[[Category: Nagata K]]
 +
[[Category: Sawano Y]]
 +
[[Category: Tanokura M]]

Current revision

Crystal structure of the hypothetical protein STK_08120 from Sulfolobus tokodaii

PDB ID 2ejx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools