2im5
From Proteopedia
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| - | [[Image:2im5.jpg|left|200px]]<br /><applet load="2im5" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2im5, resolution 2.20Å" /> | ||
| - | '''Crystal structure of Nicotinate phosphoribosyltransferase from Porphyromonas Gingivalis'''<br /> | ||
| - | == | + | ==Crystal structure of Nicotinate phosphoribosyltransferase from Porphyromonas Gingivalis== |
| - | + | <StructureSection load='2im5' size='340' side='right'caption='[[2im5]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[2im5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IM5 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2im5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2im5 OCA], [https://pdbe.org/2im5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2im5 RCSB], [https://www.ebi.ac.uk/pdbsum/2im5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2im5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2im5 TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | [ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/Q7MXV0_PORGI Q7MXV0_PORGI] Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP.[HAMAP-Rule:MF_00570] |
| - | [[ | + | == Evolutionary Conservation == |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | [[ | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/im/2im5_consurf.spt"</scriptWhenChecked> | |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2im5 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Phosphoribosyltransferase 3D structures|Phosphoribosyltransferase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Porphyromonas gingivalis]] | ||
| + | [[Category: Almo SC]] | ||
| + | [[Category: Burley SK]] | ||
| + | [[Category: Fedorov AA]] | ||
| + | [[Category: Fedorov EV]] | ||
| + | [[Category: Sauder JM]] | ||
Current revision
Crystal structure of Nicotinate phosphoribosyltransferase from Porphyromonas Gingivalis
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