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2in3
From Proteopedia
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| - | [[Image:2in3.gif|left|200px]]<br /><applet load="2in3" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2in3, resolution 1.85Å" /> | ||
| - | '''Crystal structure of a putative protein disulfide isomerase from Nitrosomonas europaea'''<br /> | ||
| - | == | + | ==Crystal structure of a putative protein disulfide isomerase from Nitrosomonas europaea== |
| - | + | <StructureSection load='2in3' size='340' side='right'caption='[[2in3]], [[Resolution|resolution]] 1.85Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2in3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_nitrosomonas"_lehmann_and_neumann_1899 "bacterium nitrosomonas" lehmann and neumann 1899]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IN3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IN3 FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | ||
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NE2553 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=915 "Bacterium nitrosomonas" Lehmann and Neumann 1899])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2in3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2in3 OCA], [https://pdbe.org/2in3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2in3 RCSB], [https://www.ebi.ac.uk/pdbsum/2in3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2in3 ProSAT], [https://www.topsan.org/Proteins/MCSG/2in3 TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/in/2in3_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2in3 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Bacterium nitrosomonas lehmann and neumann 1899]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Cuff, M E]] | ||
| + | [[Category: Edwards, A]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Onopriyenko, O]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Skarina, T]] | ||
| + | [[Category: Disulfide isomerase]] | ||
| + | [[Category: Dsba family]] | ||
| + | [[Category: Frne-like subfamily]] | ||
| + | [[Category: Isomerase]] | ||
| + | [[Category: Mcsg]] | ||
[[Category: Nitrosomonas europaea]] | [[Category: Nitrosomonas europaea]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
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Current revision
Crystal structure of a putative protein disulfide isomerase from Nitrosomonas europaea
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Categories: Bacterium nitrosomonas lehmann and neumann 1899 | Large Structures | Cuff, M E | Edwards, A | Joachimiak, A | Structural genomic | Onopriyenko, O | Savchenko, A | Skarina, T | Disulfide isomerase | Dsba family | Frne-like subfamily | Isomerase | Mcsg | Nitrosomonas europaea | PSI, Protein structure initiative
