2ioy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:03, 21 February 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ioy.jpg|left|200px]]<br /><applet load="2ioy" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2ioy, resolution 1.900&Aring;" />
 
-
'''Crystal structure of Thermoanaerobacter tengcongensis ribose binding protein'''<br />
 
-
==About this Structure==
+
==Crystal structure of Thermoanaerobacter tengcongensis ribose binding protein==
-
2IOY is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermoanaerobacter_tengcongensis Thermoanaerobacter tengcongensis] with <scene name='pdbligand=RIP:'>RIP</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IOY OCA].
+
<StructureSection load='2ioy' size='340' side='right'caption='[[2ioy]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
[[Category: Single protein]]
+
== Structural highlights ==
-
[[Category: Thermoanaerobacter tengcongensis]]
+
<table><tr><td colspan='2'>[[2ioy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IOY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IOY FirstGlance]. <br>
-
[[Category: Cuneo, M J.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
[[Category: Hellinga, H W.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RIP:RIBOSE(PYRANOSE+FORM)'>RIP</scene></td></tr>
-
[[Category: RIP]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ioy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ioy OCA], [https://pdbe.org/2ioy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ioy RCSB], [https://www.ebi.ac.uk/pdbsum/2ioy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ioy ProSAT]</span></td></tr>
-
[[Category: ribose binding protein]]
+
</table>
-
[[Category: sugar binding protein]]
+
== Function ==
-
[[Category: thermophilic proteins]]
+
[https://www.uniprot.org/uniprot/Q8RD41_CALS4 Q8RD41_CALS4]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/io/2ioy_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ioy ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:54:46 2008''
+
==See Also==
 +
*[[Ribose-binding protein|Ribose-binding protein]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Caldanaerobacter subterraneus subsp. tengcongensis]]
 +
[[Category: Large Structures]]
 +
[[Category: Cuneo MJ]]
 +
[[Category: Hellinga HW]]

Current revision

Crystal structure of Thermoanaerobacter tengcongensis ribose binding protein

PDB ID 2ioy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools