This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3vcr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:24, 14 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3vcr| PDB=3vcr | SCENE= }}
 
-
===Crystal structure of a putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase from Oleispira antarctica===
 
-
==About this Structure==
+
==Crystal structure of a putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase from Oleispira antarctica==
-
[[3vcr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Oleispira_antarctica Oleispira antarctica]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3lab 3lab]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VCR OCA].
+
<StructureSection load='3vcr' size='340' side='right'caption='[[3vcr]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3vcr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Oleispira_antarctica Oleispira antarctica]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3lab 3lab]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VCR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VCR FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vcr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vcr OCA], [https://pdbe.org/3vcr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vcr RCSB], [https://www.ebi.ac.uk/pdbsum/3vcr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vcr ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D2YW47_OLEAN D2YW47_OLEAN]
==See Also==
==See Also==
-
*[[Cytochrome c|Cytochrome c]]
+
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Oleispira antarctica]]
[[Category: Oleispira antarctica]]
-
[[Category: Edwards, A M.]]
+
[[Category: Di Leo R]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Edwards AM]]
-
[[Category: Kagan, O.]]
+
[[Category: Joachimiak A]]
-
[[Category: Leo, R Di.]]
+
[[Category: Kagan O]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Savchenko A]]
-
[[Category: Savchenko, A.]]
+
[[Category: Stogios PJ]]
-
[[Category: Stogios, P J.]]
+
[[Category: Yim V]]
-
[[Category: Yim, V.]]
+
-
[[Category: Aldolase superfamily]]
+
-
[[Category: Alpha/beta protein]]
+
-
[[Category: Class i aldolase]]
+
-
[[Category: Kdpg aldolase domain]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Tim barrel]]
+
-
[[Category: Tim beta/alpha barrel]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of a putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase from Oleispira antarctica

PDB ID 3vcr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools