4bcx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:48, 20 December 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4bcx| PDB=4bcx | SCENE= }}
 
-
===gamma 2 adaptin EAR domain crystal structure===
 
-
{{ABSTRACT_PUBMED_23851574}}
 
-
==Function==
+
==gamma 2 adaptin EAR domain crystal structure==
-
[[http://www.uniprot.org/uniprot/AP1G2_HUMAN AP1G2_HUMAN]] May function in protein sorting in late endosomes or multivesucular bodies (MVBs). Involved in MVB-assisted maturation of hepatitis B virus (HBV).<ref>PMID:9733768</ref> <ref>PMID:16867982</ref> <ref>PMID:17553870</ref>
+
<StructureSection load='4bcx' size='340' side='right'caption='[[4bcx]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4bcx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BCX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BCX FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=PDO:1,3-PROPANDIOL'>PDO</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bcx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bcx OCA], [https://pdbe.org/4bcx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bcx RCSB], [https://www.ebi.ac.uk/pdbsum/4bcx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bcx ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AP1G2_HUMAN AP1G2_HUMAN] May function in protein sorting in late endosomes or multivesucular bodies (MVBs). Involved in MVB-assisted maturation of hepatitis B virus (HBV).<ref>PMID:9733768</ref> <ref>PMID:16867982</ref> <ref>PMID:17553870</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Hepatitis B virus (HBV) is an infectious, potentially lethal human pathogen. However, there are no effective therapies for chronic HBV infections. Antiviral development is hampered by the lack of high-resolution structures for essential HBV protein-protein interactions. The interaction between preS1, an HBV surface-protein domain, and its human binding partner, gamma2-adaptin, subverts the membrane-trafficking apparatus to mediate virion export. This interaction is a putative drug target. We report here atomic-resolution descriptions of the binding thermodynamics and structural biology of the interaction between preS1 and the EAR domain of gamma2-adaptin. NMR, protein engineering, X-ray crystallography and MS showed that preS1 contains multiple gamma2-EAR-binding motifs that mimic the membrane-trafficking motifs (and binding modes) of host proteins. These motifs localize together to a relatively rigid, functionally important region of preS1, an intrinsically disordered protein. The preS1-gamma2-EAR interaction was relatively weak and efficiently outcompeted by a synthetic peptide. Our data provide the structural road map for developing peptidomimetic antivirals targeting the gamma2-EAR-preS1 interaction.
-
==About this Structure==
+
The hepatitis B virus preS1 domain hijacks host trafficking proteins by motif mimicry.,Jurgens MC, Voros J, Rautureau GJ, Shepherd DA, Pye VE, Muldoon J, Johnson CM, Ashcroft AE, Freund SM, Ferguson N Nat Chem Biol. 2013 Jul 14. doi: 10.1038/nchembio.1294. PMID:23851574<ref>PMID:23851574</ref>
-
[[4bcx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BCX OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<ref group="xtra">PMID:023851574</ref><references group="xtra"/><references/>
+
</div>
 +
<div class="pdbe-citations 4bcx" style="background-color:#fffaf0;"></div>
 +
 
 +
==See Also==
 +
*[[Adaptin 3D structures|Adaptin 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Ashcroft, A.]]
+
[[Category: Large Structures]]
-
[[Category: Ferguson, N.]]
+
[[Category: Ashcroft A]]
-
[[Category: Freund, S M.V.]]
+
[[Category: Ferguson N]]
-
[[Category: Johnson, C M.]]
+
[[Category: Freund SMV]]
-
[[Category: Juergens, M C.]]
+
[[Category: Johnson CM]]
-
[[Category: Muldoon, J.]]
+
[[Category: Juergens MC]]
-
[[Category: Pye, V E.]]
+
[[Category: Muldoon J]]
-
[[Category: Rautureau, G.]]
+
[[Category: Pye VE]]
-
[[Category: Shepherd, D.]]
+
[[Category: Rautureau G]]
-
[[Category: Voros, J.]]
+
[[Category: Shepherd D]]
-
[[Category: Gae]]
+
[[Category: Voros J]]
-
[[Category: Gamma adaptin]]
+
-
[[Category: Protein transport]]
+

Current revision

gamma 2 adaptin EAR domain crystal structure

PDB ID 4bcx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools