4j80

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:37, 17 October 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4j80| PDB=4j80 | SCENE= }}
 
-
===Thermus thermophilus DnaJ===
 
-
==Function==
+
==Thermus thermophilus DnaJ==
-
[[http://www.uniprot.org/uniprot/DNAJ2_THET8 DNAJ2_THET8]] Does not influence ATP binding or hydrolysis nor ADP release. Exerts influence on the interaction of DnaK with substrates; in the presence of DafA, DnaJ inhibits substrate binding, and substrate already bound to DnaK is displaced by DnaJ and DafA.<ref>PMID:10092456</ref>
+
<StructureSection load='4j80' size='340' side='right'caption='[[4j80]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4j80]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J80 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4J80 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">EPR , Hybrid , X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4j80 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j80 OCA], [https://pdbe.org/4j80 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4j80 RCSB], [https://www.ebi.ac.uk/pdbsum/4j80 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4j80 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DNAJ2_THET8 DNAJ2_THET8] Does not influence ATP binding or hydrolysis nor ADP release. Exerts influence on the interaction of DnaK with substrates; in the presence of DafA, DnaJ inhibits substrate binding, and substrate already bound to DnaK is displaced by DnaJ and DafA.<ref>PMID:10092456</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Hsp70 chaperones assist in a large variety of protein-folding processes in the cell. Crucial for these activities is the regulation of Hsp70 by Hsp40 cochaperones. DnaJ, the bacterial homologue of Hsp40, stimulates ATP hydrolysis by DnaK (Hsp70) and thus mediates capture of substrate protein, but is also known to possess chaperone activity of its own. The first structure of a complete functional dimeric DnaJ was determined and the mobility of its individual domains in solution was investigated. Crystal structures of the complete molecular cochaperone DnaJ from Thermus thermophilus comprising the J, GF and C-terminal domains and of the J and GF domains alone showed an ordered GF domain interacting with the J domain. Structure-based EPR spin-labelling studies as well as cross-linking results showed the existence of multiple states of DnaJ in solution with different arrangements of the various domains, which has implications for the function of DnaJ.
-
==About this Structure==
+
Combining crystallography and EPR: crystal and solution structures of the multidomain cochaperone DnaJ.,Barends TR, Brosi RW, Steinmetz A, Scherer A, Hartmann E, Eschenbach J, Lorenz T, Seidel R, Shoeman RL, Zimmermann S, Bittl R, Schlichting I, Reinstein J Acta Crystallogr D Biol Crystallogr. 2013 Aug;69(Pt 8):1540-52. doi:, 10.1107/S0907444913010640. Epub 2013 Jul 19. PMID:23897477<ref>PMID:23897477</ref>
-
[[4j80]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J80 OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<references group="xtra"/><references/>
+
</div>
-
[[Category: Thermus thermophilus hb8]]
+
<div class="pdbe-citations 4j80" style="background-color:#fffaf0;"></div>
-
[[Category: Barends, T R.M.]]
+
== References ==
-
[[Category: Bittl, R.]]
+
<references/>
-
[[Category: Brosi, R W.]]
+
__TOC__
-
[[Category: Eschenbach, J.]]
+
</StructureSection>
-
[[Category: Hartmann, E.]]
+
[[Category: Large Structures]]
-
[[Category: Lorenz, T.]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Reinstein, J.]]
+
[[Category: Barends TRM]]
-
[[Category: Scherer, A.]]
+
[[Category: Bittl R]]
-
[[Category: Schlichting, I.]]
+
[[Category: Brosi RW]]
-
[[Category: Seidel, R.]]
+
[[Category: Eschenbach J]]
-
[[Category: Shoeman, R.]]
+
[[Category: Hartmann E]]
-
[[Category: Steinmetz, A.]]
+
[[Category: Lorenz T]]
-
[[Category: Zimmermann, S.]]
+
[[Category: Reinstein J]]
-
[[Category: Chaperone]]
+
[[Category: Scherer A]]
-
[[Category: Molecular chaperone]]
+
[[Category: Schlichting I]]
-
[[Category: Thermus thermophilus dnaj2 delta mutant]]
+
[[Category: Seidel R]]
 +
[[Category: Shoeman R]]
 +
[[Category: Steinmetz A]]
 +
[[Category: Zimmermann S]]

Current revision

Thermus thermophilus DnaJ

PDB ID 4j80

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools