2j88

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[[Image:2j88.jpg|left|200px]]<br /><applet load="2j88" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="2j88, resolution 2.60&Aring;" />
 
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'''HYALURONIDASE IN COMPLEX WITH A MONOCLONAL IGG FAB FRAGMENT'''<br />
 
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==About this Structure==
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==Hyaluronidase in complex with a monoclonal IgG Fab fragment==
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2J88 is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Apis_mellifera Apis mellifera]. Active as [http://en.wikipedia.org/wiki/Hyalurononglucosaminidase Hyalurononglucosaminidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.35 3.2.1.35] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J88 OCA].
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<StructureSection load='2j88' size='340' side='right'caption='[[2j88]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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[[Category: Apis mellifera]]
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== Structural highlights ==
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[[Category: Hyalurononglucosaminidase]]
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<table><tr><td colspan='2'>[[2j88]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Apis_mellifera Apis mellifera] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J88 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J88 FirstGlance]. <br>
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[[Category: Protein complex]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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[[Category: Markovic-Housley, Z.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j88 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j88 OCA], [https://pdbe.org/2j88 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j88 RCSB], [https://www.ebi.ac.uk/pdbsum/2j88 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j88 ProSAT]</span></td></tr>
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[[Category: Padavattan, S.]]
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</table>
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[[Category: Schirmer, T.]]
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== Function ==
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[[Category: 7-stranded (beta/alpha) tim barrel]]
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[https://www.uniprot.org/uniprot/HUGA_APIME HUGA_APIME] Hydrolyzes high molecular weight hyaluronic acid to produce small oligosaccharides (By similarity).
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[[Category: allergen]]
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== Evolutionary Conservation ==
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[[Category: glycoprotein]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: glycosidase]]
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Check<jmol>
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[[Category: glycosidase family 56]]
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<jmolCheckbox>
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[[Category: hydrolase]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j8/2j88_consurf.spt"</scriptWhenChecked>
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[[Category: immunoglobulin domain]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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[[Category: zymogen]]
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j88 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The major allergens of honeybee venom, hyaluronidase (Hyal) and phospholipase A2, can induce life-threatening IgE-mediated allergic reactions in humans. Although conventional immunotherapy is effective, up to 40% of patients develop allergic side effects including anaphylaxis and thus, there is a need for an improved immunotherapy. A murine monoclonal anti-Hyal IgG1 antibody (mAb 21E11), that competed for Hyal binding with IgEs from sera of bee venom allergic patients, was raised. The fragment of these IgG antibodies which bind to antigen (Fab) was produced and complexed (1:1) with Hyal. The crystal structure determination of Hyal/Fab 21E11 complex (2.6 A) enabled the identification of the Hyal-IgG interface which provides indirect information on the Hyal-IgE interaction (B-cell epitope). The epitope is composed of a linear array of nine residues (Arg138, His141-Arg148) located at the tip of a helix-turn-helix motive which protrudes away from the globular core and fits tightly into the deep surface pocket formed by the residues from the six complementarity determining regions (CDRs) of the Fab. The epitope is continuous and yet its conformation appears to be essential for Ab recognition, since the synthetic 15-mer peptide comprising the entire epitope (Arg138-Glu152) is neither recognized by mAb 21E11 nor by human IgEs. The structure of the complex provides the basis for the rational design of Hyal derivatives with reduced allergenic activity, which could be used in the development of safer allergen-specific immunotherapy.
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:00:18 2008''
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Identification of a B-cell epitope of hyaluronidase, a major bee venom allergen, from its crystal structure in complex with a specific Fab.,Padavattan S, Schirmer T, Schmidt M, Akdis C, Valenta R, Mittermann I, Soldatova L, Slater J, Mueller U, Markovic-Housley Z J Mol Biol. 2007 May 4;368(3):742-52. Epub 2007 Feb 22. PMID:17374540<ref>PMID:17374540</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2j88" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Hyaluronidase 3D structures|Hyaluronidase 3D structures]]
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*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Apis mellifera]]
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[[Category: Large Structures]]
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[[Category: Mus musculus]]
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[[Category: Markovic-Housley Z]]
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[[Category: Padavattan S]]
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[[Category: Schirmer T]]

Current revision

Hyaluronidase in complex with a monoclonal IgG Fab fragment

PDB ID 2j88

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