4kdz

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{{STRUCTURE_4kdz| PDB=4kdz | SCENE= }}
 
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===Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)===
 
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==Function==
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==Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)==
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[[http://www.uniprot.org/uniprot/Q1R4Y9_ECOUT Q1R4Y9_ECOUT]] Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide (By similarity).[HAMAP-Rule:MF_01885]
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<StructureSection load='4kdz' size='340' side='right'caption='[[4kdz]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4kdz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_UTI89 Escherichia coli UTI89]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KDZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KDZ FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.32&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kdz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kdz OCA], [https://pdbe.org/4kdz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kdz RCSB], [https://www.ebi.ac.uk/pdbsum/4kdz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kdz ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q1R4Y9_ECOUT Q1R4Y9_ECOUT] Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide (By similarity).[HAMAP-Rule:MF_01885]
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==About this Structure==
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==See Also==
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[[4kdz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_uti89 Escherichia coli uti89]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KDZ OCA].
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*[[TRNA methyltransferase 3D structures|TRNA methyltransferase 3D structures]]
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[[Category: Escherichia coli uti89]]
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__TOC__
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[[Category: Almo, S C.]]
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</StructureSection>
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[[Category: Bhosle, R.]]
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[[Category: Escherichia coli UTI89]]
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[[Category: Kim, J.]]
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[[Category: Large Structures]]
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[[Category: NYSGRC, New York Structural Genomics Research Consortium.]]
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[[Category: Almo SC]]
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[[Category: Toro, R.]]
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[[Category: Bhosle R]]
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[[Category: New york structural genomics research consortium]]
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[[Category: Kim J]]
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[[Category: Nysgrc]]
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[[Category: Toro R]]
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[[Category: Psi-biology]]
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[[Category: S-adenosyl-l-methionine]]
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[[Category: Spou methyltransferase]]
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[[Category: Structural genomic]]
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[[Category: Transferase]]
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Current revision

Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)

PDB ID 4kdz

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