4kq6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:03, 20 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4kq6| PDB=4kq6 | SCENE= }}
 
-
===Product complex of lumazine synthase from candida glabrata===
 
-
{{ABSTRACT_PUBMED_23897480}}
 
-
==About this Structure==
+
==Product complex of lumazine synthase from candida glabrata==
-
[[4kq6]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Candida_glabrata_cbs_138 Candida glabrata cbs 138]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4gef 4gef]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KQ6 OCA].
+
<StructureSection load='4kq6' size='340' side='right'caption='[[4kq6]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4kq6]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Candida_glabrata_CBS_138 Candida glabrata CBS 138]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4gef 4gef]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KQ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KQ6 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.24&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DLZ:1-DEOXY-1-(6,7-DIMETHYL-2,4-DIOXO-3,4-DIHYDROPTERIDIN-8(2H)-YL)-D-RIBITOL'>DLZ</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kq6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kq6 OCA], [https://pdbe.org/4kq6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kq6 RCSB], [https://www.ebi.ac.uk/pdbsum/4kq6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kq6 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6FXA8_CANGA Q6FXA8_CANGA]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Candida glabrata has emerged as an important fungal pathogen with intrinsic resistance to azole drugs. The limited efficacy of and resistance to existing antifungals is driving the need to identify new drug targets. The enzyme 6,7-dimethyl-8-(D-ribityl)lumazine synthase is part of the riboflavin-biosynthesis pathway essential to fungi and bacteria and is a potential drug target for the development of broad-spectrum antifungal drugs. The X-ray crystal structure of recombinant lumazine synthase from C. glabrata was obtained at 2.24 A resolution and revealed a dimer of homopentamers, with one in five subunits containing a product molecule from the catalytic reaction.
-
==Reference==
+
Catalysis product captured in lumazine synthase from the fungal pathogen Candida glabrata.,Shankar M, Wilbanks SM, Nakatani Y, Monk BC, Tyndall JD Acta Crystallogr D Biol Crystallogr. 2013 Aug;69(Pt 8):1580-6. doi:, 10.1107/S0907444913010949. Epub 2013 Jul 20. PMID:23897480<ref>PMID:23897480</ref>
-
<ref group="xtra">PMID:023897480</ref><references group="xtra"/><references/>
+
 
-
[[Category: 6,7-dimethyl-8-ribityllumazine synthase]]
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Candida glabrata cbs 138]]
+
</div>
-
[[Category: Monk, B C.]]
+
<div class="pdbe-citations 4kq6" style="background-color:#fffaf0;"></div>
-
[[Category: Nakatani, Y.]]
+
== References ==
-
[[Category: Shankar, M.]]
+
<references/>
-
[[Category: Tyndall, J D.A.]]
+
__TOC__
-
[[Category: Wilbanks, S M.]]
+
</StructureSection>
-
[[Category: Lumazine synthase]]
+
[[Category: Large Structures]]
-
[[Category: Riboflavin biosynthesis]]
+
[[Category: Monk BC]]
-
[[Category: Transferase]]
+
[[Category: Nakatani Y]]
 +
[[Category: Shankar M]]
 +
[[Category: Tyndall JDA]]
 +
[[Category: Wilbanks SM]]

Current revision

Product complex of lumazine synthase from candida glabrata

PDB ID 4kq6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools