2o1z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:22, 30 October 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2o1z.gif|left|200px]]<br /><applet load="2o1z" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2o1z, resolution 2.40&Aring;" />
 
-
'''Plasmodium vivax Ribonucleotide Reductase Subunit R2 (Pv086155)'''<br />
 
-
==About this Structure==
+
==Plasmodium vivax Ribonucleotide Reductase Subunit R2 (Pv086155)==
-
2O1Z is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax] with <scene name='pdbligand=FE:'>FE</scene> and <scene name='pdbligand=UNX:'>UNX</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O1Z OCA].
+
<StructureSection load='2o1z' size='340' side='right'caption='[[2o1z]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
[[Category: Plasmodium vivax]]
+
== Structural highlights ==
-
[[Category: Protein complex]]
+
<table><tr><td colspan='2'>[[2o1z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O1Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O1Z FirstGlance]. <br>
-
[[Category: Amani, M.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
[[Category: Arrowsmith, C H.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
[[Category: Artz, J D.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o1z OCA], [https://pdbe.org/2o1z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o1z RCSB], [https://www.ebi.ac.uk/pdbsum/2o1z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o1z ProSAT]</span></td></tr>
-
[[Category: Bochkarev, A.]]
+
</table>
-
[[Category: Dong, A.]]
+
== Function ==
-
[[Category: Edwards, A M.]]
+
[https://www.uniprot.org/uniprot/A5K1H0_PLAVS A5K1H0_PLAVS]
-
[[Category: Hassanali, A.]]
+
== Evolutionary Conservation ==
-
[[Category: Hui, R.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Lew, J.]]
+
Check<jmol>
-
[[Category: Lin, Y H.]]
+
<jmolCheckbox>
-
[[Category: Melone, M.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o1/2o1z_consurf.spt"</scriptWhenChecked>
-
[[Category: Nordlund, P.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Qiu, W.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: SGC, Structural Genomics Consortium.]]
+
</jmolCheckbox>
-
[[Category: Sundstrom, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o1z ConSurf].
-
[[Category: Tempel, W.]]
+
<div style="clear:both"></div>
-
[[Category: Weigelt, J.]]
+
-
[[Category: Wernimont, A K.]]
+
-
[[Category: Zhao, Y.]]
+
-
[[Category: FE]]
+
-
[[Category: UNX]]
+
-
[[Category: diiron]]
+
-
[[Category: dna replication]]
+
-
[[Category: iron]]
+
-
[[Category: metal-binding]]
+
-
[[Category: oxidoreductase]]
+
-
[[Category: r2]]
+
-
[[Category: r2 subunit]]
+
-
[[Category: radical]]
+
-
[[Category: ribonucleotide reductase]]
+
-
[[Category: sgc]]
+
-
[[Category: small subunit ribonucleotide reductase]]
+
-
[[Category: structural genomics]]
+
-
[[Category: structural genomics consortium]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:13:31 2008''
+
==See Also==
 +
*[[Ribonucleotide reductase 3D structures|Ribonucleotide reductase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Plasmodium vivax]]
 +
[[Category: Amani M]]
 +
[[Category: Arrowsmith CH]]
 +
[[Category: Artz JD]]
 +
[[Category: Bochkarev A]]
 +
[[Category: Dong A]]
 +
[[Category: Edwards AM]]
 +
[[Category: Hassanali A]]
 +
[[Category: Hui R]]
 +
[[Category: Lew J]]
 +
[[Category: Lin YH]]
 +
[[Category: Melone M]]
 +
[[Category: Nordlund P]]
 +
[[Category: Qiu W]]
 +
[[Category: Sundstrom M]]
 +
[[Category: Tempel W]]
 +
[[Category: Weigelt J]]
 +
[[Category: Wernimont AK]]
 +
[[Category: Zhao Y]]

Current revision

Plasmodium vivax Ribonucleotide Reductase Subunit R2 (Pv086155)

PDB ID 2o1z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2o1z"
Personal tools