This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2o92

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:56, 25 October 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2o92.gif|left|200px]]<br /><applet load="2o92" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2o92, resolution 3.00&Aring;" />
 
-
'''Crystal structure of a signalling protein (SPG-40) complex with tetrasaccharide at 3.0A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of a signalling protein (SPG-40) complex with tetrasaccharide at 3.0A resolution==
-
2O92 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O92 OCA].
+
<StructureSection load='2o92' size='340' side='right'caption='[[2o92]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
[[Category: Capra hircus]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2o92]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Capra_hircus Capra hircus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O92 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O92 FirstGlance]. <br>
-
[[Category: Kaur, P.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
[[Category: Sharma, P.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
[[Category: Sharma, S.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o92 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o92 OCA], [https://pdbe.org/2o92 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o92 RCSB], [https://www.ebi.ac.uk/pdbsum/2o92 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o92 ProSAT]</span></td></tr>
-
[[Category: Singh, N.]]
+
</table>
-
[[Category: Singh, T P.]]
+
== Function ==
-
[[Category: complex]]
+
[https://www.uniprot.org/uniprot/CH3L1_CAPHI CH3L1_CAPHI] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment.
-
[[Category: saccharide]]
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o9/2o92_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o92 ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:15:52 2008''
+
==See Also==
 +
*[[Chitinase-3-like protein 3D structures|Chitinase-3-like protein 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Capra hircus]]
 +
[[Category: Large Structures]]
 +
[[Category: Kaur P]]
 +
[[Category: Sharma P]]
 +
[[Category: Sharma S]]
 +
[[Category: Singh N]]
 +
[[Category: Singh TP]]

Current revision

Crystal structure of a signalling protein (SPG-40) complex with tetrasaccharide at 3.0A resolution

PDB ID 2o92

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2o92"
Personal tools