4lc1
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- | {{STRUCTURE_4lc1| PDB=4lc1 | SCENE= }} | ||
- | ===MeaB, A Bacterial Homolog of MMAA, Bound to GDP and crystallized in the presence of GDP and [AlF4]-=== | ||
- | {{ABSTRACT_PUBMED_23996001}} | ||
- | == | + | ==MeaB, A Bacterial Homolog of MMAA, Bound to GDP and crystallized in the presence of GDP and [AlF4]-== |
- | [[4lc1]] is a 2 chain structure with sequence from [ | + | <StructureSection load='4lc1' size='340' side='right'caption='[[4lc1]], [[Resolution|resolution]] 1.80Å' scene=''> |
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4lc1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methylorubrum_extorquens_AM1 Methylorubrum extorquens AM1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LC1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LC1 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lc1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lc1 OCA], [https://pdbe.org/4lc1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lc1 RCSB], [https://www.ebi.ac.uk/pdbsum/4lc1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lc1 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/C5AP93_METEA C5AP93_METEA] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | MeaB is an accessory GTPase protein involved in the assembly, protection and reactivation of 5'-deoxyadenosylcobalamin-dependent methyl malonyl-CoA mutase (MCM). Mutations in the human ortholog of MeaB result in methylmalonic aciduria, an inborn error of metabolism. G-proteins typically utilize conserved switch I and II motifs for signaling to effector proteins via conformational changes elicited by nucleotide-binding and hydrolysis. Our recent discovery that MeaB employs an unusual switch III region for bidirectional signaling with MCM raised questions about the roles of the switch I and II motifs in MeaB. In this study, we have addressed the functions of conserved switch II residues by performing alanine-scanning mutagenesis. Our results demonstrate that the GTPase activity of MeaB is auto-inhibited by switch II and that this loop is important for coupling nucleotide-sensitive conformational changes in switch III to elicit the multiple chaperone functions of MeaB. Furthermore, we report the structure of MeaB-GDP crystallized in the presence of AlFx- in order to form the putative transition state analog, GDP-AlF4-. The resulting crystal structure and its comparison to related G-proteins supports the conclusion that the catalytic site of MeaB is incomplete in the absence of the GTPase-activating protein, MCM, and therefore unable to stabilize the transition state analog. Favoring an inactive conformation in the absence of the client MCM protein might represent a strategy for suppressing the intrinsic GTPase activity of MeaB in which the switch II loop plays an important role. | ||
- | + | Autoinhibition and signalling by the switch II motif in the G-protein chaperone of a radical B12 enzyme.,Lofgren M, Koutmos M, Banerjee R J Biol Chem. 2013 Aug 30. PMID:23996001<ref>PMID:23996001</ref> | |
- | <ref | + | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | [[Category: | + | <div class="pdbe-citations 4lc1" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | == References == |
- | [[Category: | + | <references/> |
- | [[Category: | + | __TOC__ |
- | [[Category: | + | </StructureSection> |
- | [[Category: | + | [[Category: Large Structures]] |
+ | [[Category: Methylorubrum extorquens AM1]] | ||
+ | [[Category: Banerjee R]] | ||
+ | [[Category: Koutmos M]] | ||
+ | [[Category: Lofgren M]] | ||
+ | [[Category: Padovani D]] |
Current revision
MeaB, A Bacterial Homolog of MMAA, Bound to GDP and crystallized in the presence of GDP and [AlF4]-
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