This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2omo
From Proteopedia
(Difference between revisions)
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2omo.gif|left|200px]]<br /><applet load="2omo" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2omo, resolution 1.83Å" /> | ||
| - | '''Putative antibiotic biosynthesis monooxygenase from Nitrosomonas europaea'''<br /> | ||
| - | == | + | ==Putative antibiotic biosynthesis monooxygenase from Nitrosomonas europaea== |
| - | + | <StructureSection load='2omo' size='340' side='right'caption='[[2omo]], [[Resolution|resolution]] 1.83Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2omo]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea Nitrosomonas europaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OMO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OMO FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2omo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2omo OCA], [https://pdbe.org/2omo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2omo RCSB], [https://www.ebi.ac.uk/pdbsum/2omo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2omo ProSAT], [https://www.topsan.org/Proteins/MCSG/2omo TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q82WP3_NITEU Q82WP3_NITEU] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/om/2omo_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2omo ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Nitrosomonas europaea]] | [[Category: Nitrosomonas europaea]] | ||
| - | + | [[Category: Edwards A]] | |
| - | [[Category: Edwards | + | [[Category: Evdokimova E]] |
| - | [[Category: Evdokimova | + | [[Category: Joachimiak A]] |
| - | [[Category: Joachimiak | + | [[Category: Kagan O]] |
| - | [[Category: Kagan | + | [[Category: Osipiuk J]] |
| - | + | [[Category: Savchenko A]] | |
| - | [[Category: Osipiuk | + | |
| - | [[Category: Savchenko | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Putative antibiotic biosynthesis monooxygenase from Nitrosomonas europaea
| |||||||||||
