4how

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{{STRUCTURE_4how| PDB=4how | SCENE= }}
 
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===The crystal structure of isomaltulose synthase from Erwinia rhapontici NX5===
 
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{{ABSTRACT_PUBMED_24069347}}
 
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==About this Structure==
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==The crystal structure of isomaltulose synthase from Erwinia rhapontici NX5==
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[[4how]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Erwinia_rhapontici Erwinia rhapontici]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HOW OCA].
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<StructureSection load='4how' size='340' side='right'caption='[[4how]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4how]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Erwinia_rhapontici Erwinia rhapontici]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HOW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HOW FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4how FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4how OCA], [https://pdbe.org/4how PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4how RCSB], [https://www.ebi.ac.uk/pdbsum/4how PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4how ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/D9MPF2_ERWRD D9MPF2_ERWRD]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Sucrose isomerase NX-5 from Erwiniarhapontici efficiently catalyzes the isomerization of sucrose to isomaltulose (main product) and trehalulose (by-product). To investigate the molecular mechanism controlling sucrose isomer formation, we determined the crystal structures of native NX-5 and its mutant complexes E295Q/sucrose and D241A/glucose at 1.70 A, 1.70 A and 2.00 A, respectively. The overall structure and active site architecture of NX-5 resemble those of other reported sucrose isomerases. Strikingly, the substrate binding mode of NX-5 is also similar to that of trehalulose synthase from Pseudomonasmesoacidophila MX-45 (MutB). Detailed structural analysis revealed the catalytic RXDRX motif and the adjacent 10-residue loop of NX-5 and isomaltulose synthase PalI from Klebsiella sp. LX3 adopt a distinct orientation from those of trehalulose synthases. Mutations of the loop region of NX-5 resulted in significant changes of the product ratio between isomaltulose and trehalulose. The molecular dynamics simulation data supported the product specificity of NX-5 towards isomaltulose and the role of the loop(330-339) in NX-5 catalysis. This work should prove useful for the engineering of sucrose isomerase for industrial carbohydrate biotransformations.
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==Reference==
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The Structural Basis of Erwinia rhapontici Isomaltulose Synthase.,Xu Z, Li S, Li J, Li Y, Feng X, Wang R, Xu H, Zhou J PLoS One. 2013 Sep 19;8(9):e74788. doi: 10.1371/journal.pone.0074788. PMID:24069347<ref>PMID:24069347</ref>
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<ref group="xtra">PMID:024069347</ref><references group="xtra"/><references/>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4how" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Trehalulose synthase|Trehalulose synthase]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Erwinia rhapontici]]
[[Category: Erwinia rhapontici]]
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[[Category: Isomaltulose synthase]]
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[[Category: Large Structures]]
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[[Category: Li, S.]]
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[[Category: Li S]]
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[[Category: Xu, H.]]
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[[Category: Xu H]]
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[[Category: Xu, Z.]]
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[[Category: Xu Z]]
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[[Category: Zhou, J.]]
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[[Category: Zhou J]]
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[[Category: Calcium binding]]
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[[Category: Hydrolase]]
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[[Category: Isomerase]]
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[[Category: Tim barrel]]
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Current revision

The crystal structure of isomaltulose synthase from Erwinia rhapontici NX5

PDB ID 4how

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