2p31

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[[Image:2p31.gif|left|200px]]<br /><applet load="2p31" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="2p31, resolution 2.00&Aring;" />
 
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'''Crystal structure of human glutathione peroxidase 7'''<br />
 
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==About this Structure==
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==Crystal structure of human glutathione peroxidase 7==
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2P31 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=CL:'>CL</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Glutathione_peroxidase Glutathione peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.9 1.11.1.9] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P31 OCA].
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<StructureSection load='2p31' size='340' side='right'caption='[[2p31]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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[[Category: Glutathione peroxidase]]
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== Structural highlights ==
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[[Category: Homo sapiens]]
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<table><tr><td colspan='2'>[[2p31]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P31 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P31 FirstGlance]. <br>
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[[Category: Single protein]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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[[Category: Arrowsmith, C H.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
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[[Category: Delft, F von.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p31 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p31 OCA], [https://pdbe.org/2p31 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p31 RCSB], [https://www.ebi.ac.uk/pdbsum/2p31 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p31 ProSAT]</span></td></tr>
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[[Category: Edwards, A.]]
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</table>
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[[Category: Gileadi, O.]]
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== Disease ==
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[[Category: Johansson, C.]]
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[https://www.uniprot.org/uniprot/GPX7_HUMAN GPX7_HUMAN] Defects in GPX7 are a cause of Barrett esophagus (BE) [MIM:[https://omim.org/entry/614266 614266]. A condition characterized by a metaplastic change in which normal esophageal squamous epithelium is replaced by a columnar and intestinal-type epithelium. Patients with Barrett esophagus have an increased risk of esophageal adenocarcinoma. The main cause of Barrett esophagus is gastroesophageal reflux. The retrograde movement of acid and bile salts from the stomach into the esophagus causes prolonged injury to the esophageal epithelium and induces chronic esophagitis, which in turn is believed to trigger the pathologic changes. Note=The pathologic mechanisms leading to Barrett esophagus involve GPX7 dysfunction that results in higher levels of hydrogen peroxide and ROS-induced oxidative stress and DNA damage in esophageal cells.
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[[Category: Kavanagh, K L.]]
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== Function ==
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[[Category: Kochan, G.]]
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[https://www.uniprot.org/uniprot/GPX7_HUMAN GPX7_HUMAN] It protects esophageal epithelia from hydrogen peroxide-induced oxidative stress. It suppresses acidic bile acid-induced reactive oxigen species (ROS) and protects against oxidative DNA damage and double-strand breaks.
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[[Category: Oppermann, U.]]
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== Evolutionary Conservation ==
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[[Category: Papagrigoriou, E.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: SGC, Structural Genomics Consortium.]]
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Check<jmol>
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[[Category: Sundstrom, M.]]
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<jmolCheckbox>
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[[Category: Umeano, C.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p3/2p31_consurf.spt"</scriptWhenChecked>
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[[Category: Weigelt, J.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: CL]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: npgpx]]
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</jmolCheckbox>
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[[Category: phospholipid hydroperoxidase]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p31 ConSurf].
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[[Category: sgc]]
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<div style="clear:both"></div>
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[[Category: structural genomics]]
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[[Category: structural genomics consortium]]
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[[Category: thioredoxin fold]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:25:22 2008''
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==See Also==
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*[[Glutathione peroxidase|Glutathione peroxidase]]
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Arrowsmith CH]]
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[[Category: Edwards A]]
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[[Category: Gileadi O]]
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[[Category: Johansson C]]
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[[Category: Kavanagh KL]]
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[[Category: Kochan G]]
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[[Category: Oppermann U]]
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[[Category: Papagrigoriou E]]
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[[Category: Sundstrom M]]
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[[Category: Umeano C]]
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[[Category: Weigelt J]]
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[[Category: Von Delft F]]

Current revision

Crystal structure of human glutathione peroxidase 7

PDB ID 2p31

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