4k0j
From Proteopedia
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| - | {{Large structure}} | ||
| - | {{STRUCTURE_4k0j| PDB=4k0j | SCENE= }} | ||
| - | ===X-ray crystal structure of a heavy metal efflux pump, crystal form I=== | ||
| - | == | + | ==X-ray crystal structure of a heavy metal efflux pump, crystal form I== |
| - | [[4k0j]] is a 6 chain structure with sequence from [ | + | <StructureSection load='4k0j' size='340' side='right'caption='[[4k0j]], [[Resolution|resolution]] 3.00Å' scene=''> |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[4k0j]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_metallidurans_CH34 Cupriavidus metallidurans CH34]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K0J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4K0J FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| - | [[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4k0j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k0j OCA], [https://pdbe.org/4k0j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4k0j RCSB], [https://www.ebi.ac.uk/pdbsum/4k0j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4k0j ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | + | == Function == | |
| - | [[Category: | + | [https://www.uniprot.org/uniprot/Q1LCD8_CUPMC Q1LCD8_CUPMC] |
| - | [[Category: | + | <div style="background-color:#fffaf0;"> |
| - | [[Category: | + | == Publication Abstract from PubMed == |
| - | [[Category: | + | Efflux pumps belonging to the ubiquitous resistance-nodulation-cell division (RND) superfamily transport substrates out of cells by coupling proton conduction across the membrane to a conformationally driven pumping cycle. The heavy metal-resistant bacteria Cupriavidus metallidurans CH34 relies notably on as many as 12 heavy metal efflux pumps of the RND superfamily. Here we show that C. metallidurans CH34 ZneA is a proton driven efflux pump specific for Zn(II), and that transport of substrates through the transmembrane domain may be electrogenic. We report two X-ray crystal structures of ZneA in intermediate transport conformations, at 3.0 and 3.7 A resolution. The trimeric ZneA structures capture protomer conformations that differ in the spatial arrangement and Zn(II) occupancies at a proximal and a distal substrate binding site. Structural comparison shows that transport of substrates through a tunnel that links the two binding sites, toward an exit portal, is mediated by the conformation of a short 14-aa loop. Taken together, the ZneA structures presented here provide mechanistic insights into the conformational changes required for substrate efflux by RND superfamily transporters. |
| - | [[Category: | + | |
| - | [[Category: | + | Structures of intermediate transport states of ZneA, a Zn(II)/proton antiporter.,Pak JE, Ekende EN, Kifle EG, O'Connell JD 3rd, De Angelis F, Tessema MB, Derfoufi KM, Robles-Colmenares Y, Robbins RA, Goormaghtigh E, Vandenbussche G, Stroud RM Proc Natl Acad Sci U S A. 2013 Nov 12;110(46):18484-9. doi:, 10.1073/pnas.1318705110. Epub 2013 Oct 30. PMID:24173033<ref>PMID:24173033</ref> |
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 4k0j" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Cupriavidus metallidurans CH34]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Ngonlong Ekende E]] | ||
| + | [[Category: Pak JE]] | ||
| + | [[Category: Stroud RM]] | ||
| + | [[Category: Vandenbussche G]] | ||
Current revision
X-ray crystal structure of a heavy metal efflux pump, crystal form I
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