This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2p8t
From Proteopedia
(Difference between revisions)
| (15 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2p8t.gif|left|200px]]<br /><applet load="2p8t" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2p8t, resolution 1.800Å" /> | ||
| - | '''Hypothetical protein PH0730 from Pyrococcus horikoshii OT3'''<br /> | ||
| - | == | + | ==Hypothetical protein PH0730 from Pyrococcus horikoshii OT3== |
| - | + | <StructureSection load='2p8t' size='340' side='right'caption='[[2p8t]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[2p8t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P8T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P8T FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p8t OCA], [https://pdbe.org/2p8t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p8t RCSB], [https://www.ebi.ac.uk/pdbsum/2p8t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p8t ProSAT], [https://www.topsan.org/Proteins/RSGI/2p8t TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | + | == Function == | |
| - | [ | + | [https://www.uniprot.org/uniprot/O58461_PYRHO O58461_PYRHO] |
| - | [ | + | == Evolutionary Conservation == |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p8/2p8t_consurf.spt"</scriptWhenChecked> |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p8t ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Pyrococcus horikoshii OT3]] |
| - | [[Category: | + | [[Category: Chen L]] |
| - | [[Category: | + | [[Category: Chrzas J]] |
| - | [[Category: | + | [[Category: Ebihara A]] |
| - | [[Category: | + | [[Category: Fu Z-Q]] |
| - | [[Category: | + | [[Category: Kuramitsu S]] |
| - | [[Category: | + | [[Category: Rose JP]] |
| - | [[Category: | + | [[Category: Shinkai A]] |
| - | + | [[Category: Swindell JT]] | |
| - | + | [[Category: Wang B-C]] | |
| + | [[Category: Yokoyama S]] | ||
| + | [[Category: Zhao M]] | ||
| + | [[Category: Zhu J]] | ||
Current revision
Hypothetical protein PH0730 from Pyrococcus horikoshii OT3
| |||||||||||
Categories: Large Structures | Pyrococcus horikoshii OT3 | Chen L | Chrzas J | Ebihara A | Fu Z-Q | Kuramitsu S | Rose JP | Shinkai A | Swindell JT | Wang B-C | Yokoyama S | Zhao M | Zhu J
