2paj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:08, 21 February 2024) (edit) (undo)
 
(17 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2paj.jpg|left|200px]]<br /><applet load="2paj" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2paj, resolution 2.70&Aring;" />
 
-
'''Crystal structure of an amidohydrolase from an environmental sample of Sargasso sea'''<br />
 
-
==About this Structure==
+
==Crystal structure of an amidohydrolase from an environmental sample of Sargasso sea==
-
2PAJ is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Unidentified Unidentified] with <scene name='pdbligand=ZN:'>ZN</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PAJ OCA].
+
<StructureSection load='2paj' size='340' side='right'caption='[[2paj]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
[[Category: Protein complex]]
+
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2paj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PAJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PAJ FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2paj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2paj OCA], [https://pdbe.org/2paj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2paj RCSB], [https://www.ebi.ac.uk/pdbsum/2paj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2paj ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2paj TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pa/2paj_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2paj ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Unidentified]]
[[Category: Unidentified]]
-
[[Category: Agarwal, R.]]
+
[[Category: Agarwal R]]
-
[[Category: Burley, S K.]]
+
[[Category: Burley SK]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Swaminathan S]]
-
[[Category: Swaminathan, S.]]
+
-
[[Category: ZN]]
+
-
[[Category: 9339a]]
+
-
[[Category: amidohydrolase]]
+
-
[[Category: crystal structure]]
+
-
[[Category: environmental sample]]
+
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-ii]]
+
-
[[Category: sargasso sea]]
+
-
[[Category: structural genomics]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:27:44 2008''
+

Current revision

Crystal structure of an amidohydrolase from an environmental sample of Sargasso sea

PDB ID 2paj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools