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2pd1
From Proteopedia
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| - | [[Image:2pd1.jpg|left|200px]]<br /><applet load="2pd1" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2pd1, resolution 1.86Å" /> | ||
| - | '''Crystal structure of NE2512 protein of unknown function from Nitrosomonas europaea'''<br /> | ||
| - | == | + | ==Crystal structure of NE2512 protein of unknown function from Nitrosomonas europaea== |
| - | + | <StructureSection load='2pd1' size='340' side='right'caption='[[2pd1]], [[Resolution|resolution]] 1.86Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [ | + | <table><tr><td colspan='2'>[[2pd1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_nitrosomonas"_lehmann_and_neumann_1899 "bacterium nitrosomonas" lehmann and neumann 1899]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PD1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PD1 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr> |
| - | [ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NE2512 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=915 "Bacterium nitrosomonas" Lehmann and Neumann 1899])</td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pd1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pd1 OCA], [https://pdbe.org/2pd1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pd1 RCSB], [https://www.ebi.ac.uk/pdbsum/2pd1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pd1 ProSAT], [https://www.topsan.org/Proteins/MCSG/2pd1 TOPSAN]</span></td></tr> |
| - | [[Category: | + | </table> |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pd/2pd1_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pd1 ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | + | </StructureSection> | |
| - | + | [[Category: Bacterium nitrosomonas lehmann and neumann 1899]] | |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Edwards, A]] | ||
| + | [[Category: Evdokimova, E]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Kagan, O]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Osipiuk, J]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Apc7253]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: Ne2512 protein]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of NE2512 protein of unknown function from Nitrosomonas europaea
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