This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2pn0
From Proteopedia
(Difference between revisions)
| (13 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2pn0.gif|left|200px]]<br /><applet load="2pn0" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2pn0, resolution 1.70Å" /> | ||
| - | '''Prokaryotic transcription elongation factor GreA/GreB from Nitrosomonas europaea'''<br /> | ||
| - | == | + | ==Prokaryotic transcription elongation factor GreA/GreB from Nitrosomonas europaea== |
| - | + | <StructureSection load='2pn0' size='340' side='right'caption='[[2pn0]], [[Resolution|resolution]] 1.70Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[2pn0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_nitrosomonas"_lehmann_and_neumann_1899 "bacterium nitrosomonas" lehmann and neumann 1899]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PN0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PN0 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr> |
| - | [[ | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2eul|2eul]]</div></td></tr> |
| - | [[ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rnk, NE2130 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=915 "Bacterium nitrosomonas" Lehmann and Neumann 1899])</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pn0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pn0 OCA], [https://pdbe.org/2pn0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pn0 RCSB], [https://www.ebi.ac.uk/pdbsum/2pn0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pn0 ProSAT], [https://www.topsan.org/Proteins/MCSG/2pn0 TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | [ | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pn/2pn0_consurf.spt"</scriptWhenChecked> |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | [ | + | </jmolCheckbox> |
| - | [[ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pn0 ConSurf]. |
| - | + | <div style="clear:both"></div> | |
| - | + | ==See Also== | |
| + | *[[Elongation factor 3D structures|Elongation factor 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Bacterium nitrosomonas lehmann and neumann 1899]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Edwards, A]] | ||
| + | [[Category: Evdokimova, E]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Kagan, O]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Osipiuk, J]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Apc6349]] | ||
| + | [[Category: Grea/greb]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Transcription]] | ||
| + | [[Category: Transcription elongation factor]] | ||
Current revision
Prokaryotic transcription elongation factor GreA/GreB from Nitrosomonas europaea
| |||||||||||
