4k0j

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{{Large structure}}
 
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{{STRUCTURE_4k0j| PDB=4k0j | SCENE= }}
 
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===X-ray crystal structure of a heavy metal efflux pump, crystal form I===
 
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==About this Structure==
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==X-ray crystal structure of a heavy metal efflux pump, crystal form I==
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[[4k0j]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Cupriavidus_metallidurans_ch34 Cupriavidus metallidurans ch34]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K0J OCA].
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<StructureSection load='4k0j' size='340' side='right'caption='[[4k0j]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
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[[Category: Cupriavidus metallidurans ch34]]
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== Structural highlights ==
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[[Category: CSMP, Center for Structures of Membrane Proteins.]]
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<table><tr><td colspan='2'>[[4k0j]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_metallidurans_CH34 Cupriavidus metallidurans CH34]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K0J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4K0J FirstGlance]. <br>
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[[Category: Ekende, E Ngonlong.]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
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[[Category: Pak, J E.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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[[Category: Stroud, R M.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4k0j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k0j OCA], [https://pdbe.org/4k0j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4k0j RCSB], [https://www.ebi.ac.uk/pdbsum/4k0j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4k0j ProSAT]</span></td></tr>
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[[Category: Vandenbussche, G.]]
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</table>
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[[Category: Center for structures of membrane protein]]
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== Function ==
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[[Category: Csmp]]
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[https://www.uniprot.org/uniprot/Q1LCD8_CUPMC Q1LCD8_CUPMC]
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[[Category: Heavy metal efflux pump]]
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<div style="background-color:#fffaf0;">
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[[Category: Inner membrane]]
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== Publication Abstract from PubMed ==
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[[Category: Psi-biology]]
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Efflux pumps belonging to the ubiquitous resistance-nodulation-cell division (RND) superfamily transport substrates out of cells by coupling proton conduction across the membrane to a conformationally driven pumping cycle. The heavy metal-resistant bacteria Cupriavidus metallidurans CH34 relies notably on as many as 12 heavy metal efflux pumps of the RND superfamily. Here we show that C. metallidurans CH34 ZneA is a proton driven efflux pump specific for Zn(II), and that transport of substrates through the transmembrane domain may be electrogenic. We report two X-ray crystal structures of ZneA in intermediate transport conformations, at 3.0 and 3.7 A resolution. The trimeric ZneA structures capture protomer conformations that differ in the spatial arrangement and Zn(II) occupancies at a proximal and a distal substrate binding site. Structural comparison shows that transport of substrates through a tunnel that links the two binding sites, toward an exit portal, is mediated by the conformation of a short 14-aa loop. Taken together, the ZneA structures presented here provide mechanistic insights into the conformational changes required for substrate efflux by RND superfamily transporters.
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[[Category: Structural genomic]]
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[[Category: Transport protein]]
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Structures of intermediate transport states of ZneA, a Zn(II)/proton antiporter.,Pak JE, Ekende EN, Kifle EG, O'Connell JD 3rd, De Angelis F, Tessema MB, Derfoufi KM, Robles-Colmenares Y, Robbins RA, Goormaghtigh E, Vandenbussche G, Stroud RM Proc Natl Acad Sci U S A. 2013 Nov 12;110(46):18484-9. doi:, 10.1073/pnas.1318705110. Epub 2013 Oct 30. PMID:24173033<ref>PMID:24173033</ref>
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[[Category: Zneb]]
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[[Category: Znec]]
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4k0j" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Cupriavidus metallidurans CH34]]
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[[Category: Large Structures]]
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[[Category: Ngonlong Ekende E]]
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[[Category: Pak JE]]
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[[Category: Stroud RM]]
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[[Category: Vandenbussche G]]

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X-ray crystal structure of a heavy metal efflux pump, crystal form I

PDB ID 4k0j

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