This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1mi3
From Proteopedia
(Difference between revisions)
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_1mi3| PDB=1mi3 | SCENE= }} | ||
| - | ===1.8 Angstrom structure of xylose reductase from Candida tenuis in complex with NAD=== | ||
| - | {{ABSTRACT_PUBMED_12733986}} | ||
| - | == | + | ==1.8 Angstrom structure of xylose reductase from Candida tenuis in complex with NAD== |
| - | [[ | + | <StructureSection load='1mi3' size='340' side='right'caption='[[1mi3]], [[Resolution|resolution]] 1.80Å' scene=''> |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[1mi3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Yamadazyma_tenuis Yamadazyma tenuis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MI3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MI3 FirstGlance]. <br> |
| - | [[1mi3]] is a 4 chain structure with sequence from [ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mi3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mi3 OCA], [https://pdbe.org/1mi3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mi3 RCSB], [https://www.ebi.ac.uk/pdbsum/1mi3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mi3 ProSAT]</span></td></tr> |
| - | + | </table> | |
| - | + | == Function == | |
| - | == | + | [https://www.uniprot.org/uniprot/XYL1_CANTE XYL1_CANTE] Reduces D-xylose into xylitol. Has a preference for NADPH, but can also utilize NADH as cosubstrate. |
| - | < | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mi/1mi3_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mi3 ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Yamadazyma tenuis]] | ||
| + | [[Category: Kavanagh KL]] | ||
| + | [[Category: Klimacek M]] | ||
| + | [[Category: Nidetzky B]] | ||
| + | [[Category: Wilson DK]] | ||
Current revision
1.8 Angstrom structure of xylose reductase from Candida tenuis in complex with NAD
| |||||||||||
