Ribosomal protein L18

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[[Image:1ily.png|left|200px|thumb|Crystal Structure of Ribosomal protein L18 [[1ily]]]]
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<StructureSection load='1ily' size='350' side='right' scene='' caption='Ribosomal protein L18 NMR structure (PDB code [[1ily]])'>
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{{STRUCTURE_1ily| PDB=1ily | SIZE=300| SCENE=Ribosomal_protein_L18/Cv/1 |right|CAPTION=Ribosomal protein L18 NMR structure [[1ily]] }}
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'''Ribosomal protein L18''' (RPL18) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. RPL18 binds to 5S and 23S RRNA<ref>PMID:11964156</ref>.
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</StructureSection>
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'''Ribosomal protein L18''' (RPL18) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. RPL18 binds to 5S and 23S RRNA.
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{{TOC limit|limit=2}}
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== 3D Structures of Ribosomal protein L18 ==
== 3D Structures of Ribosomal protein L18 ==
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[[1ovy]] – RPL18 – ''Geobacillus stearothermophilus'' - NMR<BR />
[[1ovy]] – RPL18 – ''Geobacillus stearothermophilus'' - NMR<BR />
[[1ily]] – TtRPL18 –''Thermus thermophilus'' - NMR<BR />
[[1ily]] – TtRPL18 –''Thermus thermophilus'' - NMR<BR />
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== References ==
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===L18 in 50S subunit+RNA===
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<references/>
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[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]], [[4byc]], [[4bye]] – TtRPL18 in 50S subunit+RNA fragments<br />
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[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]], [[4btd]], [[4kfi]], [[4kfl]], [[4kbu]], [[4kbw]], [[4kcz]], [[4kd2]], [[4kd9]], [[4kdb]], [[4kdh]], [[4kdk]], [[4k0m]], [[4k0q]], [[4jux]], [[4ejb]], [[4ejc]], [[3v6x]], [[3v6w]], [[4b8g]], [[4b8i]], [[3zn9]], [[3zne]], [[4g5l]], [[4g5n]], [[4g5u]], [[4g5w]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]], [[4dha]], [[4dhc]], [[4abs]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[3uye]], [[3uyg]], [[3tve]], [[3tvh]], [[3uxq]], [[3uxr]], [[3zvp]] - TtRPL18 in 50S subunit+5S RRNA+23S RRNA<br />
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[[3fin]] - TtRPL18 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR />
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[[2wwq]] – EcRPL18 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br />
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[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[4kix]], [[4kiz]], [[4kj1]], [[4kj3]], [[4kj5]], [[4kj7]], [[4kj9]], [[4kjb]], [[3uos]], [[3sgf]], [[3r8s]], [[3r8t]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA<br />
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[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3j37]], [[3j19]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3izu]], [[3izt]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR />
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[[3kcr]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />
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[[3bbo]] - RPL18 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br />
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[[2zjq]], [[2zjr]], [[1nkw]] - DrRPL18 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<br />
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[[1kqs]] - HmRPL18P in 50S subunit+5S RRNA+23S RRNA+CCA]] - ''Haloarcula marismortui''<br />
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[[1jj2]], [[1ffk]] - HmRPL18P in 50S subunit+5S RRNA+23S RRNA<br />
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[[3j3w]], [[3j3v]] - RPL18 in 50S subunit+ 23S RRNA – ''Bacillus subtilis'' – Cryo EM<br />
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===L18 in 50S subunit + antibiotics===
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[[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]], [[4io9]], [[4ioa]], [[4ioc]] - DrRPL18 in 50S subunit+5S RRNA+23S RRNA +antibiotics <br />
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[[2qam]], [[2qao]], [[2qba]], [[2qbc]], [[2qoz]], [[2qp1]], [[3ofc]], [[3ofz]], [[3ofr]], [[3orb]], [[4gar]], [[4gau]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+antibiotics<br />
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[[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]], [[4l6l]], [[4l6j]] - TtRPL18 in 50S subunit+5S RRNA+23S RRNA+antibiotics<br />
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[[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3cxc]] - HmRPL18P in 50S subunit+5S RRNA+23S RRNA+antibiotics<br />
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[[1m90]] - HmRPL18P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin
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===L18 in 50S subunit + ribosome releasing factor (RRF)===
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[[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+RRF<br />
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[[2rdo]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<BR />
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===L18 in 50S subunit + various proteins===
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[[2vhm]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br />
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[[2j28]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<BR />
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[[3j01]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+ preprotein translocase<br />
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[[1w2b]] - HmRPL18P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal
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===L18 in the 60S subunit===
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[[3o5h]], [[3o58]] - yRPL18 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast<br />
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[[1s1i]] - yRPL18 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<BR />
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[[3jyw]] – RPL18 in 60S subunit – Cryo EM – ''Thermomyces lanuginosus''<br />
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[[2ftc]] - RPL18 in 60S subunit+16S RRNA – Cryo EM – bovine<br />
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[[3izr]] – RPL18 in the 60S subunit – wheat <br />
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[[4a17]], [[4a1a]], [[4a1c]], [[4a1e]]- yRPL18 in 60S subunit+5S RRNA+5.8S RRNA + P0 – ''Tetrahymena thermophila''<br />
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[[3zf7]] - RPL18 in 60S subunit – ''Trypanosoma brucei'' - Cryo EM<br />
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[[3j39]] - RPL18 in 60S subunit – ''Drosophila melanogaster'' - Cryo EM<br />
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[[3j3b]] - RPL18 in 60S subunit – human - Cryo EM<br />
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===L18 in large + small ribosomal subunit===
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[[1ml5]] - EcRPL18 in 50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – EM<BR />
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===L18 in the 80S ribosome===
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[[2zkr]] – RPL18 in 80S ribosome – dog – Cryo EM<BR />
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[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

Ribosomal protein L18 NMR structure (PDB code 1ily)

Drag the structure with the mouse to rotate

3D Structures of Ribosomal protein L18

Updated on 01-October-2017

RPL18

1ovy – RPL18 – Geobacillus stearothermophilus - NMR
1ily – TtRPL18 –Thermus thermophilus - NMR

References

  1. ↑ Woestenenk EA, Gongadze GM, Shcherbakov DV, Rak AV, Garber MB, Hard T, Berglund H. The solution structure of ribosomal protein L18 from Thermus thermophilus reveals a conserved RNA-binding fold. Biochem J. 2002 May 1;363(Pt 3):553-61. PMID:11964156

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman, Alexander Berchansky

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