4m9q
From Proteopedia
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- | {{STRUCTURE_4m9q| PDB=4m9q | SCENE= }} | ||
- | ===Crystal structure of C-terminally truncated Arl13B from Chlamydomonas rheinhardtii bound to GppNHp=== | ||
- | {{ABSTRACT_PUBMED_24168557}} | ||
- | == | + | ==Crystal structure of C-terminally truncated Arl13B from Chlamydomonas rheinhardtii bound to GppNHp== |
- | [[4m9q]] is a 3 chain structure with sequence from [ | + | <StructureSection load='4m9q' size='340' side='right'caption='[[4m9q]], [[Resolution|resolution]] 2.50Å' scene=''> |
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4m9q]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M9Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4M9Q FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4m9q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m9q OCA], [https://pdbe.org/4m9q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4m9q RCSB], [https://www.ebi.ac.uk/pdbsum/4m9q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4m9q ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/ARL13_CHLRE ARL13_CHLRE] Cilium-specific protein required to control the microtubule-based, ciliary axoneme structure. May act by maintaining the association between IFT subcomplexes A and B (By similarity). | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Ciliopathies are human diseases arising from defects in primary or motile cilia. The small G protein Arl13B localizes to microtubule doublets of the ciliary axoneme and is mutated in Joubert Syndrome. Its GDP-GTP mechanistic cycle and the impact of patient mutations remain elusive. Here, we applied high resolution structural and biochemical approaches to study Arl13B. The crystal structure of Chlamydomonas rheinhardtii Arl13B comprising Gdomain and part of its unique C-terminus and biochemical experiments reveal the lack of intrinsic hydrolysis and the absence of a catalytic residue in the active site. The structure shows residues representing patient mutations R79Q and R200C to be involved in stabilizing important intramolecular interactions. Our studies suggest that Arg79 is crucial for the GDPGTP conformational change by stabilizing the large two residue register shift typical for Arf and Arl subfamily proteins. A corresponding mutation in Arl3 induces considerable defects in effector and GAP binding suggesting a loss of Arl13B function in Joubert Syndrome patients. | ||
- | + | Structural insights into the small G protein Arl13B and implications for Joubert syndrome.,Miertzschke M, Koerner C, Spoerner M, Wittinghofer A Biochem J. 2013 Oct 30. PMID:24168557<ref>PMID:24168557</ref> | |
- | <ref | + | |
- | [[Category: | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
- | [[Category: | + | </div> |
- | [[Category: Koerner | + | <div class="pdbe-citations 4m9q" style="background-color:#fffaf0;"></div> |
- | [[Category: Miertzschke | + | == References == |
- | [[Category: Spoerner | + | <references/> |
- | [[Category: Wittinghofer | + | __TOC__ |
- | + | </StructureSection> | |
- | + | [[Category: Chlamydomonas reinhardtii]] | |
- | + | [[Category: Large Structures]] | |
- | + | [[Category: Koerner C]] | |
- | + | [[Category: Miertzschke M]] | |
+ | [[Category: Spoerner M]] | ||
+ | [[Category: Wittinghofer A]] |
Current revision
Crystal structure of C-terminally truncated Arl13B from Chlamydomonas rheinhardtii bound to GppNHp
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