3zpv
From Proteopedia
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- | {{STRUCTURE_3zpv| PDB=3zpv | SCENE= }} | ||
- | ===Crystal structure of Drosophila Pygo PHD finger in complex with Legless HD1 domain=== | ||
- | {{ABSTRACT_PUBMED_24183574}} | ||
- | == | + | ==Crystal structure of Drosophila Pygo PHD finger in complex with Legless HD1 domain== |
- | [[ | + | <StructureSection load='3zpv' size='340' side='right'caption='[[3zpv]], [[Resolution|resolution]] 2.68Å' scene=''> |
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[3zpv]] is a 36 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZPV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZPV FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.68Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zpv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zpv OCA], [https://pdbe.org/3zpv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zpv RCSB], [https://www.ebi.ac.uk/pdbsum/3zpv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zpv ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/PYGO_DROME PYGO_DROME] Involved in signal transduction through the Wnt pathway. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Pygo proteins promote Armadillo- and beta-catenin-dependent transcription, by relieving Groucho-dependent repression of Wnt targets. Their PHD fingers bind histone H3 tail methylated at lysine 4, and to the HD1 domain of their Legless/BCL9 cofactors, linking Pygo to Armadillo/beta-catenin. Intriguingly, fly Pygo orthologs exhibit a tryptophan > phenylalanine substitution in their histone pocket-divider which reduces their affinity for histones. Here, we use X-ray crystallography and NMR, to discover a conspicuous groove bordering this phenylalanine in the Drosophila PHD-HD1 complex-a semi-aromatic cage recognizing asymmetrically methylated arginine 2 (R2me2a), a chromatin mark of silenced genes. Our structural model of the ternary complex reveals a distinct mode of dimethylarginine recognition, involving a polar interaction between R2me2a and its groove, the structural integrity of which is crucial for normal tissue patterning. Notably, humanized fly Pygo derepresses Notch targets, implying an inherent Notch-related function of classical Pygo orthologs, disabled in fly Pygo, which thus appears dedicated to Wnt signaling. | ||
- | + | Evolutionary Adaptation of the Fly Pygo PHD Finger toward Recognizing Histone H3 Tail Methylated at Arginine 2.,Miller TC, Mieszczanek J, Sanchez-Barrena MJ, Rutherford TJ, Fiedler M, Bienz M Structure. 2013 Oct 30. pii: S0969-2126(13)00364-X. doi:, 10.1016/j.str.2013.09.013. PMID:24183574<ref>PMID:24183574</ref> | |
- | + | ||
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | < | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 3zpv" style="background-color:#fffaf0;"></div> |
- | [[Category: Bienz | + | == References == |
- | [[Category: Fiedler | + | <references/> |
- | [[Category: Mieszczanek | + | __TOC__ |
- | [[Category: Miller | + | </StructureSection> |
- | [[Category: Rutherford | + | [[Category: Drosophila melanogaster]] |
- | [[Category: Sanchez-Barrena | + | [[Category: Large Structures]] |
- | + | [[Category: Bienz M]] | |
- | + | [[Category: Fiedler M]] | |
- | + | [[Category: Mieszczanek J]] | |
- | + | [[Category: Miller TCR]] | |
+ | [[Category: Rutherford TJ]] | ||
+ | [[Category: Sanchez-Barrena MJ]] |
Current revision
Crystal structure of Drosophila Pygo PHD finger in complex with Legless HD1 domain
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