Ribosomal protein L31

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[[Image:RPL31.png|left|200px|thumb|Crystal Structure of Ribosomal protein L31 ([[2xg0]], chain 4)]]
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<StructureSection load='' size='350' side='right' scene='Ribosomal_protein_L31/Cv/1' caption='Ribosomal protein L31 (PDB code [[4v5k]])'>
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{{STRUCTURE_2xg0| PDB=2xg0 | SIZE=300| SCENE=Ribosomal_protein_L31/Cv/1 |right|CAPTION=Ribosomal protein L31 ([[2xg0]], chain 4) }}
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'''Ribosomal protein L31''' (RPL31) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L31/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. RPL31 is found only in bacteria and some plant and algal chloroplasts<ref>PMID:17310068</ref>.
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'''Ribosomal protein L31''' (RPL31) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L31/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. RPL31 is found only in bacteria and some plant and algal chloroplasts.
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{{TOC limit|limit=2}}
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</StructureSection>
== 3D Structures of Ribosomal protein L31 ==
== 3D Structures of Ribosomal protein L31 ==
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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{{#tree:id=OrganizedByTopic|openlevels=0|
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===L31 in 50S subunit+RNA===
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*Ribosomal protein L31 in part of 70S ribosome
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[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]], [[4byc]], [[4bye]] – TtRPL31 in 50S subunit+RNA fragments- ''Thermus thermophilus''<BR />
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[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[2v47 ]], [[2v49]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]], [[4btd]], [[4kfi]], [[4kfl]], [[4kbu]], [[4kbw]], [[4kcz]], [[4kd2]], [[4kd9]], [[4kdb]], [[4kdh]], [[4kdk]], [[4k0m]], [[4k0q]], [[4jux]], [[4ejb]], [[4ejc]], [[3v6x]], [[3v6w]], [[4b8g]], [[4b8i]], [[3zn9]], [[3zne]], [[4g5l]], [[4g5n]], [[4g5u]], [[4g5w]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]], [[4dha]], [[4dhc]], [[4abs]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[3uye]], [[3uyg]], [[3tve]], [[3tvh]], [[3uxq]], [[3uxr]], [[3zvp]] - TtRPL31 in 50S subunit+5S RRNA+23S RRNA<br />
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[[3fin]] - TtRPL31 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR />
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[[3e1b]], [[3e1d]], [[2vhn]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny ]] - EcRPL31 in 50S subunit+5S RRNA+23S RRNA - ''Escherichia coli''<BR />
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[[3bbx]], [[3j37]], [[3j19]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3izu]], [[3izt]] - EcRPL31 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR />
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[[3bbo]] - RPL31 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<BR />
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[[1nkw]] - DrRPL31 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''
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===L31 in 50S subunit + antibiotics===
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[[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]] - DrRPL31 in 50S subunit+5S RRNA+23S RRNA +antibiotics<BR />
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[[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]], [[4l6l]], [[4l6j]] - TtRPL31 in 50S subunit+5S RRNA+23S RRNA+antibiotics
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===L31 in 50S subunit + ribosome releasing factor (RRF)===
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[[2rdo]] - EcRPL31 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<BR />
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===L31 in 50S subunit + various proteins===
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[[2vhm]] - EcRPL31 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<BR />
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[[2j28]] - EcRPL31 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<BR />
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===L31 in the 60S subunit===
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[[1s1i]] - yRPL31 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<BR />
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[[3o5h]], [[3o58]] - yRPL31 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA
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[[3izs]] - yRPL31 in 60S subunit + P1 + P2 - Cryo EM<br />
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[[3u5e]], [[3u5i]] - yRPL31 in 60S subunit <br />
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[[4b6a]] - yRPL31 in 60S subunit + P0 + P1 + P2 + ARX1 - Cryo EM<br />
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[[3jyw]] – RPL31 in 60S subunit – Cryo EM – ''Thermomyces lanuginosus''<BR />
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[[3izr]] – wRPL31 in the 60S subunit – wheat
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===L31 in the 80S ribosome===
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[[2zkr]] – dRPL31 in 80S ribosome – dog – Cryo EM<BR />
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===L31 in part of 70S ribosome===
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[[3iyx]], [[1iyy]] – EcRPL31 + RPL5 + RPS13 – Cryo EM<BR />
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===L31 in part of 80S ribosome===
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**[[3iyx]], [[3iyy]] – EcRPL31 + RPL5 + RPS13 – ''Escherichia coli'' - Cryo EM<BR />
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[[2ww9]], [[2wwa]] – yRPL31+RPL4+RPL17+RPL25+RPL26+RPL19+RPL34+RPL35+RPL39+25S RRNA+SSH1P+SSS1+SEB2 – Cryo EM - yeast<BR />
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*Ribosomal protein L31 in part of 80S ribosome
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[[2wwb]] - wRPL31+RPL4+RPL17+RPL19+RPL25+RPL26+RPL35+RPL39+25S RRNA+5.8S RRNA+ dSEBC61 – Cryo EM<BR />
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[[2j37]] – wRPL31 + RPL23 + RPL35 + SRP + SRP RNA<BR />
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[[2go5]] - wRPL31 + RPL23 + RPL35 + SRP + SRP receptor + SRP RNA
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**[[2ww9]], [[2wwa]] – yRPL31+RPL4+RPL17+RPL25+RPL26+RPL19+RPL34+RPL35+RPL39+25S RRNA+SSH1P+SSS1+SEB2 – Cryo EM - yeast<BR />
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**[[2wwb]] - wRPL31+RPL4+RPL17+RPL19+RPL25+RPL26+RPL35+RPL39+25S RRNA+5.8S RRNA+ dSEBC61 – wheat - Cryo EM<BR />
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**[[2j37]] – wRPL31 + RPL23 + RPL35 + SRP + SRP RNA<BR />
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**[[2go5]] - wRPL31 + RPL23 + RPL35 + SRP + SRP receptor + SRP RNA
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}}
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== References ==
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<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

Ribosomal protein L31 (PDB code 4v5k)

Drag the structure with the mouse to rotate

3D Structures of Ribosomal protein L31

Updated on 22-October-2017

References

  1. ↑ Nanamiya H, Kawamura F, Kosono S. Proteomic study of the Bacillus subtilis ribosome: Finding of zinc-dependent replacement for ribosomal protein L31 paralogues. J Gen Appl Microbiol. 2006 Oct;52(5):249-58. PMID:17310068

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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