Ribosomal protein L34

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[[Image:RPL34.png|left|200px|thumb|Crystal Structure of Ribosomal protein L34 ([[2xg0]], chain 7)]]
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<StructureSection load='' size='350' side='right' scene='Ribosomal_protein_L34/Cv/1' caption='Ribosomal protein L34 (PDB code [[4v5k]])'>
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{{STRUCTURE_2xg0| PDB=2xg0 | SIZE=300| SCENE=Ribosomal_protein_L34/Cv/1 |right|CAPTION=Ribosomal protein L34 in 50S subunit ([[2xg0]], chain 7) }}
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'''Ribosomal protein L34''' (RPL34) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L34/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome<ref>PMID:10049762</ref>.
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'''Ribosomal protein L34''' (RPL34) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L34/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome.
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</StructureSection>
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== References ==
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<references/>
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{{TOC limit|limit=2}}
 
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== 3D Structures of Ribosomal protein L34 ==
 
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
 
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===L34 in 50S subunit+RNA===
 
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[[2xg0]], [[ 2xg2]], [[ 3kir]], [[ 3kit]], [[ 3kiw]], [[ 3kiy]], [[4byc]], [[4bye]] – TtRPL34 in 50S subunit+RNA fragments - ''Thermus thermophilus''<BR />
 
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[[2x9s]], [[ 2x9u]], [[ 3kni]], [[ 3knk]], [[ 3knm]], [[ 3kno]], [[ 2wrj]], [[ 2wrl]], [[2wro]], [[ 2wrr]], [[ 3hux]], [[ 3huz]], [[ 2wh2]], [[ 2wh4]], [[ 2wdi]], [[ 2wdj]], [[2wdl]], [[ 2wdn]], [[ 1vsp]], [[ 2v47 ]], [[ 2v49]], [[ 1vsa]], [[ 2hgj]], [[ 2hgq]], [[2hgu]], [[ 2j01]], [[ 2j03]], [[ 1yl3]], [[ 3mrz]], [[ 3ms1]], [[ 3i8f]], [[ 3i8i]], [[ 3i9c]], [[ 3i9e]], [[ 3f1f]], [[ 3f1h]], [[ 3d5b]], [[ 3d5d]], [[ 2b66]], [[ 2b9n]], [[ 2b9p]], [[2y0v]], [[ 2y0x]], [[ 2y0z]], [[ 2y11]], [[ 2y13]], [[ 2y15]], [[ 2y17]], [[ 2y19]], [[3pyo]], [[ 3pyr]], [[ 3pyt]], [[ 3pyv]], [[ 2xtg]], [[ 2xux]], [[ 2xqe]], [[4btd]], [[4kfi]], [[4kfl]], [[4kbu]], [[4kbw]], [[4kcz]], [[4kd2]], [[4kd9]], [[4kdb]], [[4kdh]], [[4kdk]], [[4k0m]], [[4k0q]], [[4jux]], [[4ejb]], [[4ejc]], [[3v6x]], [[3v6w]], [[4b8g]], [[4b8i]], [[3zn9]], [[3zne]], [[4g5l]], [[4g5n]], [[4g5u]], [[4g5w]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]], [[4dha]], [[4dhc]], [[4abs]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[3uye]], [[3uyg]], [[3tve]], [[3tvh]], [[3uxq]], [[3uxr]], [[3zvp]] - TtRPL34 in 50S subunit+5S RRNA+23S RRNA<BR />
 
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[[3fin]] - TtRPL34 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR />
 
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[[2wwq]] – EcRPL34 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<BR />
 
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[[3i1n]], [[ 3i1p]], [[ 3i1r]], [[ 3i1t]], [[ 3i20]], [[ 3i22]], [[ 3e1b]], [[ 3e1d]], [[ 3df2]], [[ 3df4]], [[ 2vhn]], [[ 2qov]], [[ 2qox]], [[ 2i2t]], [[ 2i2v]], [[ 1vs6]], [[ 1vs8]], [[2aw4]], [[ 2awb]], [[ 3oas]], [[ 3oat]], [[ 3ofd]], [[ 3og0]], [[ 3ofq]], [[ 1vt2]], [[1vor]], [[ 1vou]], [[ 1vow]], [[ 1voy]], [[ 1vp0]], [[ 1pnu]], [[ 1pny ]] ,[[3j4x]], [[3j50]], [[3j51]], [[3j52]], [[3j54]], [[3j56]], [[3j58]], [[3j5a]], [[3j5c]], [[3j5e]], [[3j5g]], [[3j5i]], [[3j5k]], [[4kix]], [[4kiz]], [[4kj1]], [[4kj3]], [[4kj5]], [[4kj7]], [[4kj9]], [[4kjb]], [[3uos]], [[3sgf]], [[3r8s]], [[3r8t]] - EcRPL34 in 50S subunit+5S RRNA+23S RRNA<BR />
 
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[[3fik]], [[ 3bbx]], [[3j37]], [[3j19]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3izu]], [[3izt]] - EcRPL34 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR />
 
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[[3bbo]] - RPL34 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<BR />
 
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[[2zjq]], [[ 2zjr]], [[ 1nkw]] - DrRPL34 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<BR />
 
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[[1kqs]] - HmRPL34P in 50S subunit+5S RRNA+23S RRNA+CCA]] - ''Haloarcula marismortui''<BR />
 
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[[1jj2]], [[ 1ffk]], [[ 3cc2]], [[ 3cc4]], [[ 2otj]], [[ 2otl]], [[ 1s72]], [[ 1qvf]], [[ 1nji]] - HmRPL34P in 50S subunit+5S RRNA+23S RRNA<BR />
 
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[[1qvg]] - HmRPL34P in 50S subunit+5S RRNA+23S RRNA+CCA<BR />
 
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[[3cc7]], [[ 3cce]], [[ 3ccj]], [[ 3ccl]], [[ 3ccm]], [[ 3ccq]], [[ 3ccr]], [[ 3ccs]], [[3ccu]], [[ 3ccv]] - HmRPL34P in 50S subunit+5S RRNA+23S RRNA (mutant) <BR />
 
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[[3cma]], [[ 3cme]] - HmRPL34P in 50S subunit+5S RRNA+23S RRNA+CCA-Phe-CAP-BIO<br />
 
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[[3j3w]], [[3j3v]] - RPL34 in 50S subunit+23S RRNA – ''Bacillus subtilis'' – Cryo-EM<br />
 
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===L34 in 50S subunit + antibiotics===
 
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[[3dll]], [[ 2zjp]], [[ 3cf5]], [[ 1xbp]], [[ 1sm1]], [[ 1nwx]], [[ 1nwy]], [[ 3pio]], [[ 3pip]], [[4io9]], [[4ioa]], [[4ioc]] - DrRPL34 in 50S subunit+5S RRNA+23S RRNA +antibiotics<BR />
 
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[[2qam]], [[ 2qao]], [[ 2qba]], [[ 2qbc]], [[ 2qoz]], [[ 2qp1]], [[ 3ofc]], [[ 3ofz]], [[3ofr]], [[ 3orb]], [[4gar]], [[4gau]] - EcRPL34 in 50S subunit+5S RRNA+23S RRNA+antibiotics<BR />
 
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[[3oh5]], [[ 3oh7]], [[ 3ohj]], [[ 3ohk]], [[ 3ohz]], [[ 3oi1]], [[ 3oi3]], [[ 3oi5]], [[4l6l]], [[4l6j]] - TtRPL34 in 50S subunit+5S RRNA+23S RRNA+antibiotics<BR />
 
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[[1k73]], [[ 1kc8]], [[ 1k8a]], [[ 1k9m]], [[ 1kd1]], [[ 3i55]], [[ 3i56]], [[ 3g4s]], [[3g6e]], [[ 3g71]], [[ 3cd6]], [[ 1q7y]], [[ 1q81]], [[ 1q82]], [[ 1n8r]] - HmRPL34P in 50S subunit+5S RRNA+23S RRNA+antibiotics<BR />
 
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[[1m90]] - HmRPL34P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin<BR />
 
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[[3cpw]] - HmRPL34P in 50S subunit+5S RRNA+23S RRNA+ linezolid+CCA-Phe-ACA
 
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===L34 in 50S subunit + ribosome releasing factor (RRF)===
 
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[[2qbe]], [[ 2qbg]], [[ 2qbi]], [[ 2qbk]], [[ 2z4l]], [[ 2z4n]] - EcRPL34 in 50S subunit+5S RRNA+23S RRNA+RRF<BR />
 
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[[2rdo]] - EcRPL34 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<BR />
 
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===L34 in 50S subunit + various proteins===
 
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[[2vhm]] - EcRPL34 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<BR />
 
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[[2j28]] - EcRPL34 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<BR />
 
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[[3j01]], [[3kcr]] – EcRPL34 in 50S subunit+5S RRNA+23S RRNA+ preprotein translocase<br />
 
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[[1w2b]] - HmRPL34P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal
 
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===L34 in the 60S subunit===
 
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[[3o5h]], [[ 3o58]] - yRPL34 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast
 
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[[1s1i]] - yRPL34 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<BR />
 
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[[2ftc]] - RPL34 in 60S subunit+16S RRNA – Cryo EM – bovine<BR />
 
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[[3izr]] – wRPL34 in the 60S subunit – wheat<br />
 
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[[4a18]], [[4a19]], [[4a1b]], [[4a1d]] - RPL34 in 60S subunit+26S RRNA + EIF-6 – ''Tetrahymena thermophila''<br />
 
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[[3j3b]] - hRPL34 in 60S subunit + P0 + P1 + P2 - human - Cryo EM<br />
 
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

Ribosomal protein L34 (PDB code 4v5k)

Drag the structure with the mouse to rotate

References

  1. Moorthamer M, Chaudhuri B. Identification of ribosomal protein L34 as a novel Cdk5 inhibitor. Biochem Biophys Res Commun. 1999 Feb 24;255(3):631-8. PMID:10049762 doi:http://dx.doi.org/10.1006/bbrc.1999.0145

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Michal Harel, Joel L. Sussman, Alexander Berchansky

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