3a3j

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:59, 13 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3a3j| PDB=3a3j | SCENE= }}
 
-
===Crystal structures of penicillin binding protein 5 from Haemophilus influenzae===
 
-
{{ABSTRACT_PUBMED_19958776}}
 
-
==About this Structure==
+
==Crystal structures of penicillin binding protein 5 from Haemophilus influenzae==
-
[[3a3j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacterium_influenzae"_lehmann_and_neumann_1896 "bacterium influenzae" lehmann and neumann 1896]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A3J OCA].
+
<StructureSection load='3a3j' size='340' side='right'caption='[[3a3j]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3a3j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A3J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A3J FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a3j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a3j OCA], [https://pdbe.org/3a3j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a3j RCSB], [https://www.ebi.ac.uk/pdbsum/3a3j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a3j ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DACA_HAEIN DACA_HAEIN] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a3/3a3j_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a3j ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Penicillin-binding protein|Penicillin-binding protein]]
+
*[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:019958776</ref><references group="xtra"/><references/>
+
[[Category: Haemophilus influenzae]]
-
[[Category: Bacterium influenzae lehmann and neumann 1896]]
+
[[Category: Large Structures]]
-
[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
+
[[Category: Kawai F]]
-
[[Category: Kawai, F.]]
+
[[Category: Park S-Y]]
-
[[Category: Park, S Y.]]
+
[[Category: Roper DI]]
-
[[Category: Roper, D I.]]
+
[[Category: Tame JRH]]
-
[[Category: Tame, J R.H.]]
+
-
[[Category: Daca]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Pbp5]]
+
-
[[Category: Penicillin binding protein 5]]
+

Current revision

Crystal structures of penicillin binding protein 5 from Haemophilus influenzae

PDB ID 3a3j

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools