2qng

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:26, 25 June 2021) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qng.jpg|left|200px]]<br /><applet load="2qng" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2qng, resolution 1.40&Aring;" />
 
-
'''Crytal structure of unknown function protein SAV2460'''<br />
 
-
==About this Structure==
+
==Crystal structure of unknown function protein SAV2460==
-
2QNG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_avermitilis Streptomyces avermitilis] with <scene name='pdbligand=CA:'>CA</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QNG OCA].
+
<StructureSection load='2qng' size='340' side='right'caption='[[2qng]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
-
[[Category: Single protein]]
+
== Structural highlights ==
-
[[Category: Streptomyces avermitilis]]
+
<table><tr><td colspan='2'>[[2qng]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"streptomyces_avermitilis"_burg_et_al._1979 "streptomyces avermitilis" burg et al. 1979]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QNG FirstGlance]. <br>
-
[[Category: Chang, C.]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
[[Category: Edwards, A M.]]
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Joachimiak, A.]]
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SAV2460 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=33903 "Streptomyces avermitilis" Burg et al. 1979])</td></tr>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qng OCA], [https://pdbe.org/2qng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qng RCSB], [https://www.ebi.ac.uk/pdbsum/2qng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qng ProSAT], [https://www.topsan.org/Proteins/MCSG/2qng TOPSAN]</span></td></tr>
-
[[Category: Savchenko, A.]]
+
</table>
-
[[Category: Xu, X.]]
+
== Evolutionary Conservation ==
-
[[Category: Zheng, H.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: CA]]
+
Check<jmol>
-
[[Category: mcsg]]
+
<jmolCheckbox>
-
[[Category: midwest center for structural genomics]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qn/2qng_consurf.spt"</scriptWhenChecked>
-
[[Category: protein structure initiative]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: psi-2]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: streptomyces avermitilis]]
+
</jmolCheckbox>
-
[[Category: structural genomics]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qng ConSurf].
-
[[Category: uncharacterized protein]]
+
<div style="clear:both"></div>
-
[[Category: unknown function]]
+
__TOC__
-
 
+
</StructureSection>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:40:39 2008''
+
[[Category: Streptomyces avermitilis burg et al. 1979]]
 +
[[Category: Large Structures]]
 +
[[Category: Chang, C]]
 +
[[Category: Edwards, A M]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Xu, X]]
 +
[[Category: Zheng, H]]
 +
[[Category: Mcsg]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Streptomyces avermitili]]
 +
[[Category: Uncharacterized protein]]
 +
[[Category: Unknown function]]

Current revision

Crystal structure of unknown function protein SAV2460

PDB ID 2qng

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools